Dear all, Sorry not monitoring this email for some time. I no longer have the time to maintain the CNEr package and would like to deprecate it unless there is some volunteer to keep maintaining it.
Thanks, Ge From: Lori Shepherd <shepherd.b...@gmail.com> Date: Monday, 23 June 2025 at 13:05 To: Charles Plessy <charles.ple...@oist.jp> Cc: bioc-devel@r-project.org <bioc-devel@r-project.org>, Ge Tan <ge_...@live.com>, g...@me.com <g...@me.com> Subject: Re: [Bioc-devel] CNEr fails to build; patch available. We hope that the maintainer is still active and willing to maintain their package; Bioconductor admin will not push for a maintainer to ensure all packages are actively maintained. If we do not hear from the maintainer or have an explicit request to deprecate the package from them, we can have someone in the community volunteer to maintain the package consistent with Bioconductors end of life policy and package naming policy that maintainers agree to on submission; but that is only if the current maintainer does not respond and most ideally with the current maintainers permission. Let us see if Ge Tan responds shortly. Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center On Sun, Jun 22, 2025 at 9:22 PM Charles Plessy <charles.ple...@oist.jp<mailto:charles.ple...@oist.jp>> wrote: Hi Ge and Bioc admins, CNEr fails to build with recent GCC, preventing the installation of its dependency chain. https://github.com/ge11232002/CNEr/issues/28 A patch is available from NixOS. It looks sane to me. https://patch-diff.githubusercontent.com/raw/NixOS/nixpkgs/pull/411384.patch Can Ge or an admin push it? Have a nice day, Charles -- Charles Plessy - - ~ ~ ~ ~ ~ ~~~~ ~ ~ ~ ~ ~ - - charles.ple...@oist.jp<mailto:charles.ple...@oist.jp> Okinawa Institute of Science and Technology Graduate University Senior staff scientist ~~ Luscombe Unit ~~ https://groups.oist.jp/grsu Toots from work - ~~ ~~~~ ~~ - https://fediscience.org/@charles_plessy _______________________________________________ Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org> mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
