Fri. Sept 3rd 2010 EBI
Try ProFit ttp://www.bioinf.org.uk/software/profit/ as you can give the atom names you want to fit. Miri On Fri, 3 Sep 2010, Rex Palmer wrote:
This is not really protein crystallography but we are trying to model build a ligand into a protein binding site. A similar ligand is already in place and we want to replace this by initially superimposing a phenyl ring which is common to both ligands. We understand that such superpositioning can be done with eg Quanta but do not have access to this program. Does anyone know of a downloadable program that we could use instead? Rex Palmer Birkbeck College, London
