Nice one Pavel. PDB_REDO actually runs on these files but it's not pretty. I 
updated my stripper program to remove all atoms with occ<0.00 instead of 0.00
 
Cheers,
Robbie
 


Date: Mon, 4 Apr 2011 07:26:23 -0700
From: pafon...@gmail.com
Subject: Re: [ccp4bb] what to do with disordered side chains
To: CCP4BB@JISCMAIL.AC.UK

Hi Dale,



 Set the occupancy of a marker atom to -99.99.
This will unambiguously mark the atom as an imaginary one.  This
will, of course, break every program that reads PDB format files,


may be not every -:)


phenix.model_vs_data works just fine with


http://www.rcsb.org/pdb/files/1BQU.pdb
http://www.rcsb.org/pdb/files/1azr.pdb


(Um... I guess I just created some work for PDB_REDO folks, sorry -:) )


All the best!
Pavel.


                                          

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