Do I feel stupid! My previous message about Chimera should have been addresses to Yuri Pompeu, but not to Bostjan Kobe.
Sincerely, Petr On Dec 8, 2011, at 6:26 AM, Yuri Pompeu wrote: > I once saw a figure showing the protein as surface, but instead of having it > coloured by atom type > or potential, it was shown by percent conservation in the family. Something > like red highly conserved, all the way to white, not conserved at all... > Now, I assume the figure was done by uploading aligned sequnces of several > members of a family, and the colouring > the generated surface accordingly. > Does anyone know a way to do this more elegantly than what I tried doing? > ps. I quit colouring them manually after I remebered my protein was 407 aa > long...
