I'm (still) using ccp4.6.1.1. Scripts that used to superimpose one tRNA on another now all return the error
YOU HAVE FAILED TO FIND ANY ATOMS TO FIT I've looked high and low for a reason for this and failed. The pdb files themselves look normal and behave well in PYMOL. They have CRYST1 cards. I cannot even superimpose a file on itself! Anyone have any suggestions? Thanks so much, Charlie here is what I'm trying to implement: lsqkab XYZIN1 $1 XYZIN2 $2 XYZOUT $2_$1 >$2_$1.log << END-lsqkab FIT RESIDUE MAIN 2 TO 6 MATCH 2 to 6 FIT RESIDUE MAIN 68 TO 72 MATCH 68 to 72 OUTPUT XYZ END END-lsqkab