Dont you look at the graphs from the log file?
This table gives you all sorts of information including R and Rfree in
resolution shells..
Eleanor
**** Things for loggraph, R factor and
others ****
$TABLE: Cycle 11. Rfactor analysis, F distribution v resln :
$GRAPHS:Cycle 11. <Rfactor> v. resln :N:1,6,7,11,12:
:Cycle 11. <Fobs> and <Fc> v. resln :N:1,4,5,9,10:
:Cycle 11. % observed v. resln :N:1,3:
$$
M(4SSQ/LL) NR_used %_obs M(Fo_used) M(Fc_used) Rf_used WR_used
NR_free M(Fo_free) M(Fc_free) Rf_free WR_free $$
$$
0.008 1365 96.51 726.5 585.6 0.51 0.55 72 686.2 539.4
0.59 0.62
0.023 2411 98.00 498.1 446.2 0.54 0.56 131 489.5 412.9
0.57 0.58
0.037 3086 97.10 536.9 429.7 0.55 0.56 164 563.6 431.4
0.57 0.57
0.052 3605 96.71 600.3 450.7 0.55 0.55 211 595.3 455.8
0.59 0.59
0.067 4075 96.11 516.0 355.9 0.56 0.56 199 552.2 354.8
0.55 0.54
0.082 4558 97.20 425.2 288.7 0.56 0.55 228 425.1 304.8
0.57 0.54
0.096 5010 97.84 322.6 230.4 0.55 0.53 256 320.5 229.6
0.60 0.58
0.111 5376 98.91 252.1 193.5 0.55 0.53 273 256.8 195.7
0.52 0.50
0.126 5727 99.11 213.0 170.2 0.53 0.51 289 209.4 170.1
0.59 0.56
0.141 6121 99.21 174.5 142.0 0.54 0.52 307 171.1 144.9
0.61 0.57
0.155 6381 99.31 144.9 122.6 0.47 0.45 341 136.1 115.1
0.57 0.53
0.170 6677 99.12 129.9 107.6 0.55 0.52 339 129.5 110.5
0.60 0.58
0.185 6963 99.12 116.6 93.8 0.55 0.53 390 113.4 96.3
0.54 0.53
0.199 7194 99.09 100.7 79.4 0.55 0.54 405 106.4 84.0
0.55 0.53
0.214 7427 99.18 87.6 70.9 0.53 0.52 400 88.9 71.3
0.53 0.52
0.229 7702 98.68 77.3 61.2 0.52 0.52 395 80.2 61.7
0.54 0.53
0.244 7963 98.92 65.6 52.3 0.48 0.48 428 65.5 53.7
0.54 0.54
0.258 8198 98.48 56.8 44.6 0.46 0.46 437 53.5 43.6
0.49 0.49
0.273 8375 98.66 47.7 37.5 0.43 0.43 428 48.0 37.6
0.47 0.48
0.288 8611 98.24 40.9 32.1 0.42 0.42 450 41.8 32.1
0.50 0.50
$$
On 7 December 2017 at 01:07, Bernhard Rupp <hofkristall...@gmail.com> wrote:
> You can find these numbers in the header of the output model coordinate
> file.
>
>
>
> BR
>
>
>
> *From:* CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] *On Behalf Of *Xiao
> Lei
> *Sent:* Wednesday, December 6, 2017 2:40 PM
> *To:* CCP4BB@JISCMAIL.AC.UK
> *Subject:* [ccp4bb] How to find the Rfree and R in the highest resolution
> bin in Refmac 5?
>
>
>
> Dear All,
>
> I am asking how to find the Rfree and R in the highest resolution bin in
> Refmac 5 output?
>
> I used Refmac5 in refinement of protein structure at 3A resolution.
> Output of Refmac5 gives Rfee and R as:
>
> Initial Final
>
> R factor 0.2900 0.2052
>
> R free 0.3015 0.2639
>
>
> I'd also like to see the Rfree and R in the highest resolution bin. I
> checked log file in Refmac5 and found M(4SSQ/LL) resolution range table
> with columns of Rf_free and WR_free, I searched in internet and still could
> not understand the Rf_free and WR_free label meaning. I'd like to find
> something like Rfree XXX (XXX); R XXX (XXX) (the highest resolution bin
> value in the parenthesis).
>
>
>
> thanks ahead.
>
>
>
>
>
