Dear Shijun How did you convert?
If H5ToXDS it throws away all header information - this tool will preserve the metadata: https://github.com/biochem-fan/eiger2cbf which should allow XDSGUI to work. If DIALS can read the data but comes out with the wrong answer, please could you provide some more information (off list) so that we can assist? There was a thread a couple of days ago re: HKL with Eigers - short version is that you need an update, apparently. While writing I see your subsequent question: "When I run dials.index it result me "Sorry: No suitable lattice could be found", but the other software can give me C2 space group. How could I DO with this situation" Check the meta data - look at the images, is the beam centre in about the correct position? Is the spindle rotation correct? Best wishes Graeme ________________________________ From: CCP4 bulletin board [CCP4BB@JISCMAIL.AC.UK] on behalf of 张士军 [21620150150...@stu.xmu.edu.cn] Sent: 20 December 2017 08:50 To: ccp4bb Subject: [ccp4bb] cannot read h5 data file Dear all I just collected some data with Eiger16M whose file format is *.h5. But I cannot read it with HKL2000, because I don't have the Eiger16M detector license now, while, I have *.cbf detector license. So I transfered the *.h5 to *.cbf files, but the problem is XDSGUI still cannot read them,and HKL2000 can read it, can search peak, but cannot index it with warning me ''no enough peaks to index the data'',when I check the peaks are much enough to index, whearas dials can read it, but the cell parameters are not the same with before. Anyone can tell me what's wrong with it? Thanks a lot !!! Best Regards Shijun -- This e-mail and any attachments may contain confidential, copyright and or privileged material, and are for the use of the intended addressee only. If you are not the intended addressee or an authorised recipient of the addressee please notify us of receipt by returning the e-mail and do not use, copy, retain, distribute or disclose the information in or attached to the e-mail. Any opinions expressed within this e-mail are those of the individual and not necessarily of Diamond Light Source Ltd. Diamond Light Source Ltd. cannot guarantee that this e-mail or any attachments are free from viruses and we cannot accept liability for any damage which you may sustain as a result of software viruses which may be transmitted in or with the message. Diamond Light Source Limited (company no. 4375679). Registered in England and Wales with its registered office at Diamond House, Harwell Science and Innovation Campus, Didcot, Oxfordshire, OX11 0DE, United Kingdom
