Dear Kevin, Glad you worked it out. Sorry I missed earlier messages. This is another common Windows problem - not just spaces either, but anything not ASCII alphanumeric is likely to cause problems.
Stuart On Tue, 17 Nov 2020 at 12:54, Kevin Cowtan < [email protected]> wrote: > Hi all > > The problem turned out to be that the user had a space in their username. > Creating a new account solved it. > > Regards, > > On Tue, 17 Nov 2020 at 10:23, Kevin Cowtan <[email protected]> > wrote: > >> Hi! >> >> I have a student trying to run i2, and a task to import merged data from >> cif which works fine for the other students is failing at the pointless >> step. >> >> The logfiles are identical up to pointless (apart from the random free-R >> flag assignment), but the problem occurs in pointless. The log file output >> is as follows: >> >> ==== Input command lines ==== >> >> >> # Task 4.3.1 pointless running pointless >> >> # Mini-MTZ input to HKLIN: >> >> # Data type parameter job annotation >> >> NAME PROJECT 2b463 CRYSTAL xtal DATASET dest >> >> HKLIN >> C:\Users\xxx\CCP4I2_PROJECTS\2b463\CCP4_JOBS\job_4\4_2b463_obsout_import_merged.mtz >> >> HKLOUT >> C:\Users\xxx\CCP4I2_PROJECTS\2b463\CCP4_JOBS\job_4\job_3\job_1\MTZUNMERGEDOUT.mtz >> >> choose spacegroup P 61 >> >> >> ==== End of input ==== >> >> >> >> ****************************************************** >> >> * * >> >> * POINTLESS * >> >> * 1.12.2 * >> >> * * >> >> * Determine Laue group from unmerged intensities * >> >> * Phil Evans MRC LMB, Cambridge * >> >> * Uses cctbx routines by Ralf Grosse-Kunstleve et al.* >> >> * * >> >> ****************************************************** >> >> >> >> **** ERROR **** >> >> >> $TEXT:Reference: $$ Please cite $$ >> >> P.R.Evans, 'Scaling and assessment of data quality' Acta Cryst. D62, 72-82 >> (2006). >> >> <a href="http://journals.iucr.org/d/issues/2006/01/00/ba5084/index.html";> >> >> <b>PDF</b></a> >> >> P.R.Evans, 'An introduction to data reduction: space-group determination, >> scaling and intensity statistics' Acta Cryst. D67, 282-292 (2011) >> >> <a href="http://journals.iucr.org/d/issues/2011/04/00/ba5158/index.html";> >> >> <b>PDF</b></a> >> >> $$ >> >> >> >> -- >> Professor Kevin Cowtan >> Email: [email protected] >> Pronouns: Please use he/him or they/them when referring to me in >> professional contexts >> Address: York Structural Biology Laboratory, Department of Chemistry >> University of York, York, YO10 5DD, UK >> ORCiD: 0000-0002-0189-1437 <https://orcid.org/0000-0002-0189-1437> >> Web: https://www.york.ac.uk/chemistry/staff/academic/a-c/kcowtan/ >> Disclaimer: http://w <http://www.york.ac.uk/docs/disclaimer/email.htm> >> ww.york.ac.uk/docs/disclaimer/email.htm >> <http://www.york.ac.uk/docs/disclaimer/email.htm> >> > > > -- > Professor Kevin Cowtan > Email: [email protected] > Pronouns: Please use he/him or they/them when referring to me in > professional contexts > Address: York Structural Biology Laboratory, Department of Chemistry > University of York, York, YO10 5DD, UK > ORCiD: 0000-0002-0189-1437 <https://orcid.org/0000-0002-0189-1437> > Web: https://www.york.ac.uk/chemistry/staff/academic/a-c/kcowtan/ > Disclaimer: http://w <http://www.york.ac.uk/docs/disclaimer/email.htm> > ww.york.ac.uk/docs/disclaimer/email.htm > <http://www.york.ac.uk/docs/disclaimer/email.htm> > > ------------------------------ > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
