Yes, Martin, we should. I think we're catching and warning about non-ASCII now. I'll check if whitespace is in the check as well, and if not add it.
On Wed, 18 Nov 2020 at 09:12, Martin Noble <[email protected]> wrote: > Should be caught in ccp4.setup-sh ? Or in ccp4i2 launch binary ? > > > Sent from my iPad > > On 17 Nov 2020, at 13:13, Stuart McNicholas < > [email protected]> wrote: > > > > ⚠ External sender. Take care when opening links or attachments. Do not > provide your login details. > Dear Kevin, > Glad you worked it out. Sorry I missed earlier messages. This is > another common Windows problem - not just spaces either, but anything not > ASCII alphanumeric is likely to cause problems. > > Stuart > > On Tue, 17 Nov 2020 at 12:54, Kevin Cowtan < > [email protected]> wrote: > >> Hi all >> >> The problem turned out to be that the user had a space in their username. >> Creating a new account solved it. >> >> Regards, >> >> On Tue, 17 Nov 2020 at 10:23, Kevin Cowtan <[email protected]> >> wrote: >> >>> Hi! >>> >>> I have a student trying to run i2, and a task to import merged data from >>> cif which works fine for the other students is failing at the pointless >>> step. >>> >>> The logfiles are identical up to pointless (apart from the random free-R >>> flag assignment), but the problem occurs in pointless. The log file output >>> is as follows: >>> >>> ==== Input command lines ==== >>> >>> >>> # Task 4.3.1 pointless running pointless >>> >>> # Mini-MTZ input to HKLIN: >>> >>> # Data type parameter job annotation >>> >>> NAME PROJECT 2b463 CRYSTAL xtal DATASET dest >>> >>> HKLIN >>> C:\Users\xxx\CCP4I2_PROJECTS\2b463\CCP4_JOBS\job_4\4_2b463_obsout_import_merged.mtz >>> >>> HKLOUT >>> C:\Users\xxx\CCP4I2_PROJECTS\2b463\CCP4_JOBS\job_4\job_3\job_1\MTZUNMERGEDOUT.mtz >>> >>> choose spacegroup P 61 >>> >>> >>> ==== End of input ==== >>> >>> >>> >>> ****************************************************** >>> >>> * * >>> >>> * POINTLESS * >>> >>> * 1.12.2 * >>> >>> * * >>> >>> * Determine Laue group from unmerged intensities * >>> >>> * Phil Evans MRC LMB, Cambridge * >>> >>> * Uses cctbx routines by Ralf Grosse-Kunstleve et al.* >>> >>> * * >>> >>> ****************************************************** >>> >>> >>> >>> **** ERROR **** >>> >>> >>> $TEXT:Reference: $$ Please cite $$ >>> >>> P.R.Evans, 'Scaling and assessment of data quality' Acta Cryst. D62, 72-82 >>> (2006). >>> >>> <a href="http://journals.iucr.org/d/issues/2006/01/00/ba5084/index.html";> >>> >>> <b>PDF</b></a> >>> >>> P.R.Evans, 'An introduction to data reduction: space-group determination, >>> scaling and intensity statistics' Acta Cryst. D67, 282-292 (2011) >>> >>> <a href="http://journals.iucr.org/d/issues/2011/04/00/ba5158/index.html";> >>> >>> <b>PDF</b></a> >>> >>> $$ >>> >>> >>> >>> -- >>> Professor Kevin Cowtan >>> Email: [email protected] >>> Pronouns: Please use he/him or they/them when referring to me in >>> professional contexts >>> Address: York Structural Biology Laboratory, Department of Chemistry >>> University of York, York, YO10 5DD, UK >>> ORCiD: 0000-0002-0189-1437 <https://orcid.org/0000-0002-0189-1437> >>> Web: https://www.york.ac.uk/chemistry/staff/academic/a-c/kcowtan/ >>> Disclaimer: http://w <http://www.york.ac.uk/docs/disclaimer/email.htm> >>> ww.york.ac.uk/docs/disclaimer/email.htm >>> <http://www.york.ac.uk/docs/disclaimer/email.htm> >>> >> >> >> -- >> Professor Kevin Cowtan >> Email: [email protected] >> Pronouns: Please use he/him or they/them when referring to me in >> professional contexts >> Address: York Structural Biology Laboratory, Department of Chemistry >> University of York, York, YO10 5DD, UK >> ORCiD: 0000-0002-0189-1437 <https://orcid.org/0000-0002-0189-1437> >> Web: https://www.york.ac.uk/chemistry/staff/academic/a-c/kcowtan/ >> Disclaimer: http://w <http://www.york.ac.uk/docs/disclaimer/email.htm> >> ww.york.ac.uk/docs/disclaimer/email.htm >> <http://www.york.ac.uk/docs/disclaimer/email.htm> >> >> ------------------------------ >> >> To unsubscribe from the CCP4BB list, click the following link: >> https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 >> > > ------------------------------ > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 > > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
