Hi Firdous, as many of us have CCP4 and phenix installed, there would be a program in phenix which does this. The name: Sort heteroatom groups.

Br, Georg.


Am 13.08.2025 um 13:21 schrieb Firdous Tarique:
Hello everyone

I have a situation where the water molecules in my protein chains are not named correctly. For example I want water molecules in protein Chain A to be named as Chain A but few water molecules are named as chain B. As the water numbers in hundreds it is difficult to do it manually. Is there a way where water molecules near chain A (let's say within 3.5 A) are automatically renamed as chain A ?

Any help is appreciated

Best

Firdous

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