Ok, so the user would set that property via the JCP interface. The MDL writer 
would then write the value if it is not null? mol file specification says 0 = 
no marking (default), (1 to 14) = (1 to 14) Would you think this is the right 
behaviour?
Stefan


On Monday 24 August 2009 17:51:10 you wrote:
> On Mon, Aug 24, 2009 at 6:27 PM, Stefan Kuhn<[email protected]> wrote:
> > On Monday 24 August 2009 09:14:28 Egon Willighagen wrote:
> > Hm, ok. What I would need is something much more simple, namely the
> > possibility for the user in JCP to set something called "valence" to an
> > int value, which would get exported to mol files (and perhaps others as
> > well). Marvin is having this. So it's not about property calcuation or
> > so, but something much more basic.
>
> IAtomType.get/setValency(Integer) ?
>
> Egon



-- 
Stefan Kuhn B. Sc. M. A.
Software Engineer in the Chemoinformatics and Metabolism Team
European Bioinformatics Institute (EBI)
Wellcome Trust Genome Campus
Hinxton, Cambridge CB10 1SD UK
Phone +44 1223 49 2657
Fax +44 (0)1223 494 468

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