OK, so the map coefficients are: 1. FCTR PHICTR 2. 2FOFCWT PH2FOFCWT 3. FOFCWT PHFOFCWT 4. FOFRGSLV PHFOFRGSLV 5. FC PHIC 6. FOSC SIGFOSC
I think that auto-open (assuming you are using a 0.6pre from the last 6 months) should automatically pick up (2) and (3) for a normal and difference map - is that what you see?
Which other columns would you like maps from? Just (1)?
Do you see a way to include in the refmac-from-coot logfile which mtz columns were used?
Sorry, didn't understand this bit. K