Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits: f9fb6f80 by Andreas Tille at 2022-01-05T13:42:19+00:00 automatic update - - - - - 2 changed files: - debian-med-tests.txt - outdated_med-packages.txt Changes: ===================================== debian-med-tests.txt ===================================== @@ -1,27 +1,27 @@ -Last-Update: Wed, 05 Jan 2022 01:42:03 +0000 +Last-Update: Wed, 05 Jan 2022 13:42:04 +0000 Source | Vote | Tasks | Tags -------------------------------+--------+-----------------------------------------------------+---------------------------------------------------------------------- - dcmtk | 176 | {imaging,covid-19} | - orthanc | 107 | {covid-19,imaging,practice} | + dcmtk | 182 | {imaging,covid-19} | + orthanc | 108 | {covid-19,imaging,practice} | orthanc-wsi | 54 | {oncology,laboratory,practice,his,covid-19,imaging} | htsjdk | 30 | {bio-dev} | - dicom3tools | 26 | {imaging} | - amide | 23 | {imaging} | - dicomscope | 22 | {imaging} | - dcm2niix | 21 | {imaging} | + dicom3tools | 27 | {imaging} | + amide | 24 | {imaging} | + dicomscope | 24 | {imaging} | + dcm2niix | 22 | {imaging} | orthanc-webviewer | 17 | {imaging} | - gdcm | 15 | {covid-19,imaging} | + gdcm | 16 | {covid-19,imaging} | gnumed-server | 15 | {covid-19,practice} | minc-tools | 14 | {imaging} | - ngs-sdk | 14 | {bio-dev} | adun.app | 13 | {bio} | - pixelmed | 13 | {imaging} | + ngs-sdk | 13 | {bio-dev} | + openslide | 13 | {imaging} | insighttoolkit4 | 12 | {imaging-dev} | - openslide | 12 | {imaging} | + invesalius | 12 | {imaging} | + pixelmed | 12 | {imaging} | dicomnifti | 11 | {imaging} | - invesalius | 11 | {imaging} | - gdcm | 10 | {imaging-dev} | + gdcm | 11 | {imaging-dev} | libminc | 9 | {imaging-dev} | nifticlib | 9 | {imaging} | jebl2 | 8 | {bio-dev} | @@ -33,7 +33,6 @@ Last-Update: Wed, 05 Jan 2022 01:42:03 +0000 mrtrix3 | 7 | {imaging} | ngs-sdk | 7 | {bio-dev} | lagan | 6 | {bio} | - librg-utils-perl | 6 | {bio} | nifti2dicom | 6 | {imaging} | nipype | 6 | {imaging,imaging-dev} | openslide | 6 | {imaging-dev} | @@ -42,21 +41,20 @@ Last-Update: Wed, 05 Jan 2022 01:42:03 +0000 salmon | 6 | {covid-19,bio} | beast-mcmc | 5 | {bio-phylogeny,bio} | libdivsufsort | 5 | {bio-dev} | + librg-utils-perl | 5 | {bio} | + nifti2dicom | 5 | {imaging} | obitools | 5 | {bio} | bio-tradis | 4 | {bio-dev,bio} | bitseq | 4 | {bio} | brig | 4 | {bio} | embassy-domainatrix | 4 | {bio,cloud} | embassy-domalign | 4 | {cloud,bio} | - nifti2dicom | 4 | {imaging} | oscar | 4 | {data,tools,practice} | tracetuner | 4 | {bio} | anfo | 3 | {bio,cloud} | arden | 3 | {cloud,bio} | assemblytics | 3 | {bio} | - atropos | 3 | {bio} | bart-view | 3 | {imaging} | - biomaj3-cli | 3 | {cloud} | canu | 3 | {bio} | cat-bat | 3 | {bio,covid-19} | clonalorigin | 3 | {bio} | @@ -83,6 +81,8 @@ Last-Update: Wed, 05 Jan 2022 01:42:03 +0000 treeview | 3 | {bio,bio-phylogeny} | tvc | 3 | {bio} | zalign | 3 | {bio,cloud} | + atropos | 2 | {bio} | + biomaj3-cli | 2 | {cloud} | blimps | 2 | {bio} | clonalframeml | 2 | {covid-19,bio} | delly | 2 | {bio,covid-19} | @@ -96,14 +96,12 @@ Last-Update: Wed, 05 Jan 2022 01:42:03 +0000 lamarc | 2 | {bio} | libpal-java | 2 | {bio-dev} | mauve-aligner | 2 | {bio} | - microbegps | 2 | {bio} | orthanc-gdcm | 2 | {imaging} | orthanc-mysql | 2 | {imaging} | papyrus | 2 | {imaging-dev} | phyutility | 2 | {bio,cloud} | pique | 2 | {bio} | placnet | 2 | {bio} | - plasmidid | 2 | {covid-19,bio} | plasmidseeker | 2 | {bio} | pplacer | 2 | {covid-19,bio,bio-phylogeny} | proalign | 2 | {bio-phylogeny,bio} | @@ -132,11 +130,12 @@ Last-Update: Wed, 05 Jan 2022 01:42:03 +0000 emboss-explorer | 1 | {bio} | getdata | 1 | {bio} | libbio-mage-utils-perl | 1 | {bio-dev} | - libchado-perl | 1 | {bio-dev} | libctapimkt | 1 | {practice} | libsbml | 1 | {bio-dev} | libvistaio | 1 | {imaging-dev} | metaphlan2 | 1 | {bio} | + microbegps | 1 | {bio} | + plasmidid | 1 | {covid-19,bio} | python-wdlparse | 1 | {bio-dev} | shovill | 1 | {covid-19,bio} | varscan | 1 | {bio,covid-19} | @@ -163,6 +162,7 @@ Last-Update: Wed, 05 Jan 2022 01:42:03 +0000 libbpp-raa | 0 | {bio-dev} | libbpp-seq | 0 | {bio-dev} | libbpp-seq-omics | 0 | {bio-dev} | + libchado-perl | 0 | {bio-dev} | libgenome | 0 | {bio-dev} | libgkarrays | 0 | {bio-dev} | libhmsbeagle | 0 | {bio-dev} | ===================================== outdated_med-packages.txt ===================================== The diff for this file was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f9fb6f80a9b498bb29927a290fe77e3d5c29295b -- View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f9fb6f80a9b498bb29927a290fe77e3d5c29295b You're receiving this email because of your account on salsa.debian.org.
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