Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits: f6cd2f6c by Andreas Tille at 2022-01-10T13:42:25+00:00 automatic update - - - - - 2 changed files: - debian-med-tests.txt - outdated_med-packages.txt Changes: ===================================== debian-med-tests.txt ===================================== @@ -1,72 +1,74 @@ -Last-Update: Mon, 10 Jan 2022 01:42:11 +0000 +Last-Update: Mon, 10 Jan 2022 13:42:10 +0000 Source | Vote | Tasks | Tags -------------------------------+--------+-----------------------------------------------------+---------------------------------------------------------------------- dcmtk | 182 | {imaging,covid-19} | orthanc | 104 | {covid-19,imaging,practice} | - orthanc-wsi | 53 | {oncology,laboratory,practice,his,covid-19,imaging} | - dicom3tools | 28 | {imaging} | + orthanc-wsi | 52 | {oncology,laboratory,practice,his,covid-19,imaging} | htsjdk | 28 | {bio-dev} | + dicom3tools | 27 | {imaging} | dicomscope | 26 | {imaging} | - amide | 24 | {imaging} | - dcm2niix | 19 | {imaging} | + amide | 25 | {imaging} | + dcm2niix | 17 | {imaging} | orthanc-webviewer | 16 | {imaging} | gdcm | 15 | {covid-19,imaging} | - minc-tools | 15 | {imaging} | gnumed-server | 14 | {covid-19,practice} | - invesalius | 14 | {imaging} | - ngs-sdk | 13 | {bio-dev} | - openslide | 13 | {imaging} | + minc-tools | 14 | {imaging} | + invesalius | 13 | {imaging} | gdcm | 12 | {imaging-dev} | - pixelmed | 12 | {imaging} | + ngs-sdk | 12 | {bio-dev} | adun.app | 11 | {bio} | - dicomnifti | 11 | {imaging} | - insighttoolkit4 | 10 | {imaging-dev} | - libminc | 9 | {imaging-dev} | + insighttoolkit4 | 11 | {imaging-dev} | + openslide | 11 | {imaging} | + pixelmed | 11 | {imaging} | + dicomnifti | 10 | {imaging} | + libminc | 10 | {imaging-dev} | mia | 9 | {imaging} | - nifticlib | 9 | {imaging} | - plastimatch | 9 | {imaging} | + nifticlib | 9 | {imaging-dev} | + biojava-live | 8 | {bio-dev} | ngs-sdk | 8 | {bio-dev} | nifti2dicom | 8 | {imaging} | - nifticlib | 8 | {imaging-dev} | + nifticlib | 8 | {imaging} | orthanc-dicomweb | 8 | {imaging,covid-19} | - biojava-live | 7 | {bio-dev} | - king | 7 | {typesetting,imaging} | + plastimatch | 8 | {imaging} | lagan | 7 | {bio} | mrtrix3 | 7 | {imaging} | nifti2dicom | 7 | {imaging} | openslide | 7 | {imaging-dev} | orthanc-postgresql | 7 | {imaging} | + king | 6 | {typesetting,imaging} | librg-utils-perl | 6 | {bio} | - ngs-sdk | 6 | {bio-dev} | nipype | 6 | {imaging,imaging-dev} | - salmon | 6 | {covid-19,bio} | libdivsufsort | 5 | {bio-dev} | + ngs-sdk | 5 | {bio-dev} | obitools | 5 | {bio} | + salmon | 5 | {covid-19,bio} | + arden | 4 | {cloud,bio} | + bart-view | 4 | {imaging} | beast-mcmc | 4 | {bio-phylogeny,bio} | bio-tradis | 4 | {bio-dev,bio} | dicompyler | 4 | {oncology} | elastix | 4 | {imaging} | + embassy-domalign | 4 | {cloud,bio} | jebl2 | 4 | {bio-dev} | + libncl | 4 | {bio} | melting | 4 | {bio,cloud} | orthanc-mysql | 4 | {imaging} | pymia | 4 | {imaging-dev} | + staden | 4 | {bio} | + tracetuner | 4 | {bio} | treeview | 4 | {bio,bio-phylogeny} | anfo | 3 | {bio,cloud} | - arden | 3 | {cloud,bio} | assemblytics | 3 | {bio} | - bart-view | 3 | {imaging} | bitseq | 3 | {bio} | brig | 3 | {bio} | cat-bat | 3 | {bio,covid-19} | clonalorigin | 3 | {bio} | embassy-domainatrix | 3 | {bio,cloud} | - embassy-domalign | 3 | {cloud,bio} | fastml | 3 | {bio} | ghmm | 3 | {bio} | jellyfish1 | 3 | {bio} | lamarc | 3 | {bio} | - libncl | 3 | {bio} | orthanc-python | 3 | {covid-19} | oscar | 3 | {data,tools,practice} | pigx-rnaseq | 3 | {bio,covid-19} | @@ -77,8 +79,7 @@ Last-Update: Mon, 10 Jan 2022 01:42:11 +0000 sibsim4 | 3 | {bio,cloud} | spread-phy | 3 | {bio,bio-phylogeny} | stacks | 3 | {bio} | - staden | 3 | {bio} | - tracetuner | 3 | {bio} | + thesias | 3 | {covid-19,bio} | tvc | 3 | {bio} | zalign | 3 | {bio,cloud} | atropos | 2 | {bio} | @@ -121,7 +122,6 @@ Last-Update: Mon, 10 Jan 2022 01:42:11 +0000 sprai | 2 | {bio} | suitename | 2 | {bio} | surankco | 2 | {bio} | - thesias | 2 | {covid-19,bio} | tophat-recondition | 2 | {covid-19,bio} | trace2dbest | 2 | {bio} | varna | 2 | {bio} | @@ -139,6 +139,7 @@ Last-Update: Mon, 10 Jan 2022 01:42:11 +0000 shovill | 1 | {covid-19,bio} | sift | 1 | {bio} | varscan | 1 | {bio,covid-19} | + vienna-rna | 1 | {covid-19,bio} | acedb | 0 | {bio,cloud} | bambamc | 0 | {bio-dev} | biojava4-live | 0 | {bio-dev} | @@ -192,8 +193,8 @@ Last-Update: Mon, 10 Jan 2022 01:42:11 +0000 parallel-fastq-dump | 0 | {covid-19} | pbcopper | 0 | {bio-dev} | pbseqlib | 0 | {bio-dev} | - python-seqcluster | 0 | {bio} | python-seqcluster | 0 | {bio-dev,covid-19} | + python-seqcluster | 0 | {bio} | resfinder-db | 0 | {bio} | sbmltoolbox | 0 | {bio-dev} | seq-gen | 0 | {bio} | @@ -201,7 +202,6 @@ Last-Update: Mon, 10 Jan 2022 01:42:11 +0000 simpleitk | 0 | {imaging-dev} | smrtanalysis | 0 | {bio,covid-19} | srf | 0 | {bio-dev} | - vienna-rna | 0 | {covid-19,bio} | xdffileio | 0 | {imaging-dev} | xxsds-dynamic | 0 | {bio-dev} | mssstest | -1 | {tools} | ===================================== outdated_med-packages.txt ===================================== The diff for this file was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f6cd2f6c288e2485ea6e29fddbfa5599fe41ca4f -- View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f6cd2f6c288e2485ea6e29fddbfa5599fe41ca4f You're receiving this email because of your account on salsa.debian.org.
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