Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits: d6c97e48 by Andreas Tille at 2022-01-24T13:42:22+00:00 automatic update - - - - - 2 changed files: - debian-med-tests.txt - outdated_med-packages.txt Changes: ===================================== debian-med-tests.txt ===================================== @@ -1,46 +1,47 @@ -Last-Update: Mon, 24 Jan 2022 01:42:03 +0000 +Last-Update: Mon, 24 Jan 2022 13:42:04 +0000 Source | Vote | Tasks | Tags -------------------------------+--------+-----------------------------------------------------+---------------------------------------------------------------------- - dcmtk | 183 | {covid-19,imaging} | - orthanc | 106 | {imaging,covid-19,practice} | - orthanc-wsi | 56 | {practice,laboratory,covid-19,imaging,his,oncology} | - htsjdk | 32 | {bio-dev} | - dicom3tools | 29 | {imaging} | - dicomscope | 29 | {imaging} | - amide | 28 | {imaging} | - dcm2niix | 22 | {imaging} | + dcmtk | 181 | {covid-19,imaging} | + orthanc | 105 | {imaging,covid-19,practice} | + orthanc-wsi | 57 | {practice,laboratory,covid-19,imaging,his,oncology} | + htsjdk | 33 | {bio-dev} | + amide | 29 | {imaging} | + dicom3tools | 28 | {imaging} | + dicomscope | 28 | {imaging} | + dcm2niix | 21 | {imaging} | orthanc-webviewer | 20 | {imaging} | - invesalius | 16 | {imaging} | + invesalius | 15 | {imaging} | gnumed-server | 14 | {practice,covid-19} | - gdcm | 13 | {covid-19,imaging} | + ngs-sdk | 14 | {bio-dev} | + gdcm | 12 | {covid-19,imaging} | gdcm | 12 | {imaging-dev} | - minc-tools | 12 | {imaging} | - ngs-sdk | 12 | {bio-dev} | - adun.app | 11 | {bio} | - openslide | 10 | {imaging} | - dicomnifti | 9 | {imaging} | - lagan | 9 | {bio} | - mia | 9 | {imaging} | + minc-tools | 11 | {imaging} | + adun.app | 10 | {bio} | + lagan | 10 | {bio} | ngs-sdk | 9 | {bio-dev} | nifti2dicom | 9 | {imaging} | + openslide | 9 | {imaging} | orthanc-dicomweb | 9 | {imaging,covid-19} | - pixelmed | 9 | {imaging} | biojava-live | 8 | {bio-dev} | + dicomnifti | 8 | {imaging} | + mia | 8 | {imaging} | mrtrix3 | 8 | {imaging} | - nifticlib | 8 | {imaging} | orthanc-postgresql | 8 | {imaging} | - plastimatch | 8 | {imaging} | + pixelmed | 8 | {imaging} | libminc | 7 | {imaging-dev} | nifti2dicom | 7 | {imaging} | nifticlib | 7 | {imaging-dev} | + nifticlib | 7 | {imaging} | + plastimatch | 7 | {imaging} | libncl | 6 | {bio} | librg-utils-perl | 6 | {bio} | + ngs-sdk | 6 | {bio-dev} | obitools | 6 | {bio} | - openslide | 6 | {imaging-dev} | dicompyler | 5 | {oncology} | jebl2 | 5 | {bio-dev} | nipype | 5 | {imaging-dev,imaging} | + openslide | 5 | {imaging-dev} | orthanc-mysql | 5 | {imaging} | salmon | 5 | {bio,covid-19} | treeview | 5 | {bio-phylogeny,bio} | @@ -50,10 +51,10 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000 embassy-domalign | 4 | {cloud,bio} | getdata | 4 | {bio} | ghmm | 4 | {bio} | + jellyfish1 | 4 | {bio} | king | 4 | {typesetting,imaging} | libdivsufsort | 4 | {bio-dev} | melting | 4 | {bio,cloud} | - ngs-sdk | 4 | {bio-dev} | pymia | 4 | {imaging-dev} | spread-phy | 4 | {bio-phylogeny,bio} | staden | 4 | {bio} | @@ -65,15 +66,15 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000 bitseq | 3 | {bio} | blimps | 3 | {bio} | brig | 3 | {bio} | + canu | 3 | {bio} | clonalorigin | 3 | {bio} | embassy-domainatrix | 3 | {bio,cloud} | fastml | 3 | {bio} | - jellyfish1 | 3 | {bio} | lamarc | 3 | {bio} | libsbml | 3 | {bio-dev} | + mhap | 3 | {bio-ngs,bio} | orthanc-gdcm | 3 | {imaging} | orthanc-python | 3 | {covid-19} | - oscar | 3 | {data,tools,practice} | phyutility | 3 | {bio,cloud} | piler | 3 | {bio} | pscan-chip | 3 | {bio} | @@ -87,11 +88,11 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000 tvc | 3 | {bio} | zalign | 3 | {cloud,bio} | biomaj3-cli | 2 | {cloud} | - canu | 2 | {bio} | cat-bat | 2 | {bio,covid-19} | clonalframeml | 2 | {covid-19,bio} | cmtk | 2 | {imaging} | delly | 2 | {covid-19,bio} | + dextractor | 2 | {bio,covid-19} | embassy-domsearch | 2 | {cloud,bio} | gatb-core | 2 | {bio} | hinge | 2 | {bio} | @@ -102,7 +103,7 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000 librdp-taxonomy-tree-java | 2 | {bio-dev} | mauve-aligner | 2 | {bio} | metaphlan2 | 2 | {bio} | - mhap | 2 | {bio-ngs,bio} | + oscar | 2 | {data,tools,practice} | placnet | 2 | {bio} | plasmidseeker | 2 | {bio} | proalign | 2 | {bio,bio-phylogeny} | @@ -121,7 +122,6 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000 trace2dbest | 2 | {bio} | atropos | 1 | {bio} | cufflinks | 1 | {bio,cloud} | - dextractor | 1 | {bio,covid-19} | emmax | 1 | {bio} | kmerresistance | 1 | {bio} | libgenome | 1 | {bio-dev} | @@ -202,9 +202,10 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000 sight | 0 | {imaging-dev} | simpleitk | 0 | {imaging-dev} | smrtanalysis | 0 | {covid-19,bio} | + snpeff | 0 | {bio,covid-19} | tipp | 0 | {bio,covid-19} | varna | 0 | {bio} | xdffileio | 0 | {imaging-dev} | xxsds-dynamic | 0 | {bio-dev} | -(234 rows) +(235 rows) ===================================== outdated_med-packages.txt ===================================== The diff for this file was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d6c97e48abd0397fe05a178ada1aa12ee7e43d85 -- View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d6c97e48abd0397fe05a178ada1aa12ee7e43d85 You're receiving this email because of your account on salsa.debian.org.
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