I have a brand new MacBook Air with Intel CPU, into which I've been
loading up all my favorite linux tools from fink. I do a lot of
data analysis using cernlib components (particularly minuit) and
so, once I got fink set up (stable and unstable) and ran both
# fink selfupdate and # fink update-all,
I tried (several times) # fink install cernlib . It built stuff
for an hour or so and terminated each time with a huge slew of
"can't find atom for N_GSYM stabs..." messages, ending with the
errors shown below (in admittedly excessive detail). I have tried
to find some reference to similar problems in FAQ to no avail, and
fink-beginners doesn't seem appropriate for this, so I'm appealing
to wiser heads. I apologize for any gaffes or breahes of protocol
or etiquette; please instruct me! -- Jess Brewer
PS: I did successfully install pyminuit, so the problem is specific
to the fortran cernlib.
______________________________________________________________________________
.
.
.
can't find atom for N_GSYM stabs iqceta:G(0,6) in
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/lib/libpacklib.a(izchav.o)
can't find atom for N_GSYM stabs
zkrakc:G(0,8)=u1288cqholk:(0,9)[EMAIL PROTECTED];ar(0,4);1;120;(0,10)[EMAIL
PROTECTED];r(0,10);0;255;,0,960;iqholk:(0,11)=ar(0,4);0;119;(0,4),0,3840;iqkrak:(0,12)=ar(0,4);0;79;(0,4),3840,2560;iqcetk:(0,13)=ar(0,4);0;121;(0,4),6400,3904;;
in
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/lib/libpacklib.a(izchav.o)
can't find atom for N_GSYM stabs cqholk:G(0,9) in
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/lib/libpacklib.a(izchav.o)
can't find atom for N_GSYM stabs iqholk:G(0,11) in
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/lib/libpacklib.a(izchav.o)
rm -f
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/bin/paw++
install -c paw++
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/bin/paw++
if [[ "i386" == "i386" && "gfortran" == "gfortran" ]] ; then
make patchy/Makefile
(cd patchy; make install.bin) || exit 1
fi
making Makefiles in /patchy...
cd
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/bin/;
\
if [ -f ../../patchy/4.15/bin/ycompar ] ; then \
ln -s ../../patchy/4.15/bin/ycompar ycompar; \
else \
echo "ycompar not linked, not existing";\
fi
ycompar not linked, not existing
cd
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/bin/;
\
if [ -f ../../patchy/4.15/bin/yedit ] ; then \
ln -s ../../patchy/4.15/bin/yedit yedit; \
else \
echo "yedit not linked, not existing";\
fi
yedit not linked, not existing
cd
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/bin/;
\
if [ -f ../../patchy/4.15/bin/yfrceta ] ; then \
ln -s ../../patchy/4.15/bin/yfrceta yfrceta; \
else \
echo "yfrceta not linked, not existing";\
fi
yfrceta not linked, not existing
cd
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/bin/;
\
if [ -f ../../patchy/4.15/bin/yindex ] ; then \
ln -s ../../patchy/4.15/bin/yindex yindex; \
else \
echo "yindex not linked, not existing";\
fi
yindex not linked, not existing
cd
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/bin/;
\
if [ -f ../../patchy/4.15/bin/ylist ] ; then \
ln -s ../../patchy/4.15/bin/ylist ylist; \
else \
echo "ylist not linked, not existing";\
fi
ylist not linked, not existing
cd
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/bin/;
\
if [ -f ../../patchy/4.15/bin/ypatchy ] ; then \
ln -s ../../patchy/4.15/bin/ypatchy ypatchy; \
else \
echo "ypatchy not linked, not existing";\
fi
ypatchy not linked, not existing
cd
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/bin/;
\
if [ -f ../../patchy/4.15/bin/ysearch ] ; then \
ln -s ../../patchy/4.15/bin/ysearch ysearch; \
else \
echo "ysearch not linked, not existing";\
fi
ysearch not linked, not existing
cd
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/bin/;
\
if [ -f ../../patchy/4.15/bin/yshift ] ; then \
ln -s ../../patchy/4.15/bin/yshift yshift; \
else \
echo "yshift not linked, not existing";\
fi
yshift not linked, not existing
cd
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/bin/;
\
if [ -f ../../patchy/4.15/bin/ytobcd ] ; then \
ln -s ../../patchy/4.15/bin/ytobcd ytobcd; \
else \
echo "ytobcd not linked, not existing";\
fi
ytobcd not linked, not existing
cd
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/bin/;
\
if [ -f ../../patchy/4.15/bin/ytobin ] ; then \
ln -s ../../patchy/4.15/bin/ytobin ytobin; \
else \
echo "ytobin not linked, not existing";\
fi
ytobin not linked, not existing
cd
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/bin/;
\
if [ -f ../../patchy/4.15/bin/ytoceta ] ; then \
ln -s ../../patchy/4.15/bin/ytoceta ytoceta; \
else \
echo "ytoceta not linked, not existing";\
fi
ytoceta not linked, not existing
rm -f fcasplit.o
gfortran -c -O -g -funroll-loops -ftree-vectorize -fomit-frame-pointer
-fno-second-underscore -fno-automatic -fno-range-check
-I/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src
-I/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src
-I/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/patchy
-I/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/include
-DCERNLIB_LINUX -DCERNLIB_UNIX -DCERNLIB_LNX
-DCERNLIB_I386 -DCERNLIB_QMGLIBC
-DCERNLIB_MACOSX
-DCERNLIB_GCC4 -DCERNLIB_GFORTRAN -o fcasplit.o fcasplit.F
gfortran fcasplit.o -o fcasplit
rm -f
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/bin/fcasplit
install -c fcasplit
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/bin/fcasplit
rm -f
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/bin/yexpand
install -c -m 0755 yexpand.script
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/bin/yexpand
PLINAME=LINUX,UNIX,LNX,I386,QMGLIBC,MACOSX,GCC4,GFORTRAN;export
PLINAME;/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/patchy/yexpand
nypatchy.cra
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/patchy/nypatchy.cra
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/patchy/yexpand: line
30: fink-build-HOME.hbAUwGTKoq/nypatchy.cra.yexp: No such file or directory
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/patchy/yexpand: line
31: fink-build-HOME.hbAUwGTKoq/nypatchy.cra.yexp: No such file or directory
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/patchy/yexpand: line
32: fink-build-HOME.hbAUwGTKoq/nypatchy.cra.yexp: No such file or directory
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/patchy/yexpand: line
34: fink-build-HOME.hbAUwGTKoq/nypatchy.cra.yexp: No such file or directory
chmod: fink-build-HOME.hbAUwGTKoq/nypatchy.cra.yexp: No such file or directory
/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/patchy/yexpand: line
36: fink-build-HOME.hbAUwGTKoq/nypatchy.cra.yexp: No such file or directory
rm: fink-build-HOME.hbAUwGTKoq/nypatchy.cra.yexp: No such file or directory
make: ***
[/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/patchy/nypatchy.cra]
Error 1
### execution of /var/tmp/tmp.2.CST0dt failed, exit code 1
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-cernlib2005-gfortran-2005-2011
(Reading database ... 64533 files and directories currently installed.)
Removing fink-buildlock-cernlib2005-gfortran-2005-2011 ...
Failed: phase compiling: cernlib2005-gfortran-2005-2011 failed
Before reporting any errors, please run "fink selfupdate" and
try again. If you continue to have issues, please check to see if the
FAQ on fink's website solves the problem. If not, ask on the fink-users
or fink-beginners mailing lists, with a carbon copy to the maintainer:
Remi Mommsen <[EMAIL PROTECTED]>
Note that this is preferable to emailing the maintainer directly, since
most fink package maintainers do not have access to all possible
hardware and software configurations.
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