Hi Jess, sorry for the late reply. I was quite busy and traveling during the last months.
On Apr 11, 2008, at 9:31 PM, Jess H. Brewer wrote: > I have a brand new MacBook Air with Intel CPU, into which I've been > loading up all my favorite linux tools from fink. I do a lot of > data analysis using cernlib components (particularly minuit) and > so, once I got fink set up (stable and unstable) and ran both > # fink selfupdate and # fink update-all, > I tried (several times) # fink install cernlib . It built stuff > for an hour or so and terminated each time with a huge slew of > "can't find atom for N_GSYM stabs..." messages, ending with the > errors shown below (in admittedly excessive detail). I have tried > to find some reference to similar problems in FAQ to no avail, and > fink-beginners doesn't seem appropriate for this, so I'm appealing > to wiser heads. I apologize for any gaffes or breahes of protocol > or etiquette; please instruct me! -- Jess Brewer > > PS: I did successfully install pyminuit, so the problem is specific > to the fortran cernlib. > ______________________________________________________________________________ > . > . > . > can't find atom for N_GSYM stabs iqceta:G(0,6) in /sw/src/fink.build/ > cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/lib/ > libpacklib.a(izchav.o) > can't find atom for N_GSYM stabs zkrakc:G(0,8)=u1288cqholk: > (0,9)[EMAIL PROTECTED];ar(0,4);1;120;(0,10)[EMAIL > PROTECTED];r(0,10);0;255;,0,960;iqholk: > (0,11)=ar(0,4);0;119;(0,4),0,3840;iqkrak:(0,12)=ar(0,4);0;79;(0,4), > 3840,2560;iqcetk:(0,13)=ar(0,4);0;121;(0,4),6400,3904;; in /sw/src/ > fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/lib/ > libpacklib.a(izchav.o) > can't find atom for N_GSYM stabs cqholk:G(0,9) in /sw/src/fink.build/ > cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/lib/ > libpacklib.a(izchav.o) > can't find atom for N_GSYM stabs iqholk:G(0,11) in /sw/src/ > fink.build/cernlib2005-gfortran-2005-2011/2005/src/cernlib/2005/lib/ > libpacklib.a(izchav.o) > rm -f /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/ > cernlib/2005/bin/paw++ > install -c paw++ /sw/src/fink.build/cernlib2005- > gfortran-2005-2011/2005/src/cernlib/2005/bin/paw++ > if [[ "i386" == "i386" && "gfortran" == "gfortran" ]] ; then > make patchy/Makefile > (cd patchy; make install.bin) || exit 1 > fi > making Makefiles in /patchy... > cd /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/ > cernlib/2005/bin/; \ > if [ -f ../../patchy/4.15/bin/ycompar ] ; then \ > ln -s ../../patchy/4.15/bin/ycompar ycompar; \ > else \ > echo "ycompar not linked, not existing";\ > fi > ycompar not linked, not existing > cd /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/ > cernlib/2005/bin/; \ > if [ -f ../../patchy/4.15/bin/yedit ] ; then \ > ln -s ../../patchy/4.15/bin/yedit yedit; \ > else \ > echo "yedit not linked, not existing";\ > fi > yedit not linked, not existing > cd /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/ > cernlib/2005/bin/; \ > if [ -f ../../patchy/4.15/bin/yfrceta ] ; then \ > ln -s ../../patchy/4.15/bin/yfrceta yfrceta; \ > else \ > echo "yfrceta not linked, not existing";\ > fi > yfrceta not linked, not existing > cd /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/ > cernlib/2005/bin/; \ > if [ -f ../../patchy/4.15/bin/yindex ] ; then \ > ln -s ../../patchy/4.15/bin/yindex yindex; \ > else \ > echo "yindex not linked, not existing";\ > fi > yindex not linked, not existing > cd /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/ > cernlib/2005/bin/; \ > if [ -f ../../patchy/4.15/bin/ylist ] ; then \ > ln -s ../../patchy/4.15/bin/ylist ylist; \ > else \ > echo "ylist not linked, not existing";\ > fi > ylist not linked, not existing > cd /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/ > cernlib/2005/bin/; \ > if [ -f ../../patchy/4.15/bin/ypatchy ] ; then \ > ln -s ../../patchy/4.15/bin/ypatchy ypatchy; \ > else \ > echo "ypatchy not linked, not existing";\ > fi > ypatchy not linked, not existing > cd /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/ > cernlib/2005/bin/; \ > if [ -f ../../patchy/4.15/bin/ysearch ] ; then \ > ln -s ../../patchy/4.15/bin/ysearch ysearch; \ > else \ > echo "ysearch not linked, not existing";\ > fi > ysearch not linked, not existing > cd /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/ > cernlib/2005/bin/; \ > if [ -f ../../patchy/4.15/bin/yshift ] ; then \ > ln -s ../../patchy/4.15/bin/yshift yshift; \ > else \ > echo "yshift not linked, not existing";\ > fi > yshift not linked, not existing > cd /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/ > cernlib/2005/bin/; \ > if [ -f ../../patchy/4.15/bin/ytobcd ] ; then \ > ln -s ../../patchy/4.15/bin/ytobcd ytobcd; \ > else \ > echo "ytobcd not linked, not existing";\ > fi > ytobcd not linked, not existing > cd /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/ > cernlib/2005/bin/; \ > if [ -f ../../patchy/4.15/bin/ytobin ] ; then \ > ln -s ../../patchy/4.15/bin/ytobin ytobin; \ > else \ > echo "ytobin not linked, not existing";\ > fi > ytobin not linked, not existing > cd /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/ > cernlib/2005/bin/; \ > if [ -f ../../patchy/4.15/bin/ytoceta ] ; then \ > ln -s ../../patchy/4.15/bin/ytoceta ytoceta; \ > else \ > echo "ytoceta not linked, not existing";\ > fi > ytoceta not linked, not existing > rm -f fcasplit.o > gfortran -c -O -g -funroll-loops -ftree-vectorize -fomit-frame- > pointer -fno-second-underscore -fno-automatic -fno-range-check -I/sw/ > src/fink.build/cernlib2005-gfortran-2005-2011/2005/src -I/sw/src/ > fink.build/cernlib2005-gfortran-2005-2011/2005/src -I/sw/src/ > fink.build/cernlib2005-gfortran-2005-2011/2005/src/patchy -I/sw/src/ > fink.build/cernlib2005-gfortran-2005-2011/2005/src/include - > DCERNLIB_LINUX -DCERNLIB_UNIX -DCERNLIB_LNX -DCERNLIB_I386 - > DCERNLIB_QMGLIBC -DCERNLIB_MACOSX - > DCERNLIB_GCC4 -DCERNLIB_GFORTRAN -o fcasplit.o fcasplit.F > gfortran fcasplit.o -o fcasplit > rm -f /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/ > cernlib/2005/bin/fcasplit > install -c fcasplit /sw/src/fink.build/cernlib2005- > gfortran-2005-2011/2005/src/cernlib/2005/bin/fcasplit > rm -f /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/ > cernlib/2005/bin/yexpand > install -c -m 0755 yexpand.script /sw/src/fink.build/cernlib2005- > gfortran-2005-2011/2005/src/cernlib/2005/bin/yexpand > PLINAME=LINUX,UNIX,LNX,I386,QMGLIBC,MACOSX,GCC4,GFORTRAN;export > PLINAME;/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/ > patchy/yexpand nypatchy.cra /sw/src/fink.build/cernlib2005- > gfortran-2005-2011/2005/src/patchy/nypatchy.cra Up to here, everything looks fine. > /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/patchy/ > yexpand: line 30: fink-build-HOME.hbAUwGTKoq/nypatchy.cra.yexp: No > such file or directory > /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/patchy/ > yexpand: line 31: fink-build-HOME.hbAUwGTKoq/nypatchy.cra.yexp: No > such file or directory > /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/patchy/ > yexpand: line 32: fink-build-HOME.hbAUwGTKoq/nypatchy.cra.yexp: No > such file or directory > /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/patchy/ > yexpand: line 34: fink-build-HOME.hbAUwGTKoq/nypatchy.cra.yexp: No > such file or directory > chmod: fink-build-HOME.hbAUwGTKoq/nypatchy.cra.yexp: No such file or > directory > /sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/src/patchy/ > yexpand: line 36: fink-build-HOME.hbAUwGTKoq/nypatchy.cra.yexp: No > such file or directory > rm: fink-build-HOME.hbAUwGTKoq/nypatchy.cra.yexp: No such file or > directory > make: *** [/sw/src/fink.build/cernlib2005-gfortran-2005-2011/2005/ > src/patchy/nypatchy.cra] Error 1 Do you know where the path 'fink-build-HOME.hbAUwGTKoq' comes from? Do you have any spaces in the path to the fink build directory? Remi ------------------------------------------------------------------------- This SF.net email is sponsored by the 2008 JavaOne(SM) Conference Don't miss this year's exciting event. There's still time to save $100. Use priority code J8TL2D2. http://ad.doubleclick.net/clk;198757673;13503038;p?http://java.sun.com/javaone _______________________________________________ Fink-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/fink-users
