You're absolutely right - the siemens mosaic files return an error in mri_convert after osirix anonymises them, while the single siemens files do not. We've been using mri_convert for siemens DTI data, so weren't playing with mosaics.

The dicom-rewriter plugin for ImageJ worked fine.

On 29/08/2006, at 7:54 AM, Doug Greve wrote:

We've had some problems with osirix in that it will strip off all the private fields. For siemens mosaics, these are necessary in order to determine the number of slices and the image positions, etc.

Greig de Zubicaray wrote:
There's also Osirix on the Mac:


and ImageJ has a plugin:


Haven't used the latter, but can vouch for the former!

regards,

Greig

On 29/08/2006, at 6:16 AM, Russ Poldrack wrote:

You can use the LONI deidentification debablet to do this:


cheers
russ

On Aug 28, 2006, at 1:07 PM, Doug Greve wrote:

Sorry, no clue.

Najmeh Khalili M. wrote:


sorry about nonstop posting!

I'm trying to remove the patient names from dicom files. I was advised to use dcm_modify_elements but it fails on DCM_Openfile.

Is there a straight forward way of doing this?

Thanks
Naj

P.S. Doug, I am still looking for the graddir tags :)


_______________________________________________
Freesurfer mailing list



-- 
Douglas N. Greve, Ph.D.
MGH-NMR Center
Phone Number: 617-724-2358 Fax: 617-726-7422

In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting


_______________________________________________
Freesurfer mailing list

---
Russell A. Poldrack, Ph.d.
Associate Professor
UCLA Department of Psychology
Franz Hall, Box 951563
Los Angeles, CA 90095-1563

phone: 310-794-1224
fax: 310-206-5895



_______________________________________________
Freesurfer mailing list



__
Dr Greig de Zubicaray
Senior Research Fellow
fMRI Laboratory, Centre for Magnetic Resonance
University of Queensland, QLD 4072, Australia
Tel: (+617) 3365 4100 (Office)
        (+617) 3365 4250 (B106, Ritchie Building)
Fax: (+617) 3365 3833
fMRI Lab Page: http://www.fmrilab.net






_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

-- 
Douglas N. Greve, Ph.D.
MGH-NMR Center
[EMAIL PROTECTED]
Phone Number: 617-724-2358 
Fax: 617-726-7422

In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting




__
Dr Greig de Zubicaray
Senior Research Fellow
fMRI Laboratory, Centre for Magnetic Resonance
University of Queensland, QLD 4072, Australia
Tel: (+617) 3365 4100 (Office)
        (+617) 3365 4250 (B106, Ritchie Building)
Fax: (+617) 3365 3833
fMRI Lab Page: http://www.fmrilab.net





_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

Reply via email to