You're absolutely right - the siemens mosaic files return an error in mri_convert after osirix anonymises them, while the single siemens files do not. We've been using mri_convert for siemens DTI data, so weren't playing with mosaics.
The dicom-rewriter plugin for ImageJ worked fine. On 29/08/2006, at 7:54 AM, Doug Greve wrote: We've had some problems with osirix in that it will strip off all the private fields. For siemens mosaics, these are necessary in order to determine the number of slices and the image positions, etc. Greig de Zubicaray wrote: There's also Osirix on the Mac: and ImageJ has a plugin: Haven't used the latter, but can vouch for the former! regards, Greig On 29/08/2006, at 6:16 AM, Russ Poldrack wrote: You can use the LONI deidentification debablet to do this: cheers russ On Aug 28, 2006, at 1:07 PM, Doug Greve wrote: Sorry, no clue. Najmeh Khalili M. wrote: sorry about nonstop posting! I'm trying to remove the patient names from dicom files. I was advised to use dcm_modify_elements but it fails on DCM_Openfile. Is there a straight forward way of doing this? Thanks Naj P.S. Doug, I am still looking for the graddir tags :) _______________________________________________ Freesurfer mailing list -- Douglas N. Greve, Ph.D. MGH-NMR Center Phone Number: 617-724-2358 Fax: 617-726-7422 In order to help us help you, please follow the steps in: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting _______________________________________________ Freesurfer mailing list --- Russell A. Poldrack, Ph.d. Associate Professor UCLA Department of Psychology Franz Hall, Box 951563 Los Angeles, CA 90095-1563 phone: 310-794-1224 fax: 310-206-5895 _______________________________________________ Freesurfer mailing list __ Dr Greig de Zubicaray Senior Research Fellow fMRI Laboratory, Centre for Magnetic Resonance University of Queensland, QLD 4072, Australia Tel: (+617) 3365 4100 (Office) (+617) 3365 4250 (B106, Ritchie Building) Fax: (+617) 3365 3833
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In order to help us help you, please follow the steps in:
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__ Dr Greig de Zubicaray Senior Research Fellow fMRI Laboratory, Centre for Magnetic Resonance University of Queensland, QLD 4072, Australia Tel: (+617) 3365 4100 (Office) (+617) 3365 4250 (B106, Ritchie Building) Fax: (+617) 3365 3833
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