Thanks for the quick replies. Notes:
Doug wrote:
> mri_convert orig.mgz orig.mgh
Ah, good to know, and lets you rename in the same step, so avoids collision.
At 9/6/2006 02:14 PM, you wrote:
1. You should keep the orig directory as that's where you store the the input data
Yep, I knew about that one :-)
Nick said: > Yes, freesurfer recognizes the filename extension .mgh > (and just doesnt do the gunzip on it internally).
But Doug said:
2. I'm not sure that everything will run smoothly with mgh. I think a lot of stuff is hardcoded to work with mgz and/or COR
Hmmm, so not sure what to make of that. Ideally programs would process the input based on the filename extension, and then produce same-format output. But that may not have been a priority.
Graham
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