Have you looked at the aparc+aseg.mgz? It has cortical and subcortical
labelings. You can convert it to analyze with mri_convert.
Behrang Nosrat Makouei wrote:
Hi,
I actually had the some extra question in addition to the
question Shahab had. So i thought to put the questions in the reply.
My final goal is to have Cortical Regions segmented at the
subjects native coordinate space. And I prefer to have the segmentation
in analyze format.
and also, I was wondering if
1- there is a way of saving Surfaces generated with FreeSurfer
into an analyze image.
2- If we can control how fine the cortical segmentation be. (the
number of regions segmented).
Behrang,
On 9/23/06, Bruce Fischl <[EMAIL PROTECTED]>
wrote:
Hi
Shahab,
the ?h.*.annot files are the cortical labelings. What exactly do you wat
to do with them?
cheers,
Bruce
On Sat, 23 Sep 2006, Shahabuddin Ansari wrote:
> Hi,
>
> I can extract subcorical objects from freesurfer segmentation,
since each object is lableled with normalized intesity value. I was
wondering if I can extract different cortical regions in the same
fashion. I can, though, view the labeled cotical surface in tksurfer.
>
> Thanks
> Shahab
>
>
> ---------------------------------
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Behrang Nosrat Makouei,
Engineering Science,
MICA Lab (MIAL), TASC 9400, SFU.
cell: 778-885-5016
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