Sebastian,
Thank you for pointing-out the excluded items. I have updated the
distributions so that those items are now included (fslview, and the
updated mri_nu_correct.mni). Note: the 32bit RH9 fsl distribution is
included with Freesurfer because FSL's 64bit FC5 distribution does not
work with Centos4 (a libstdc++ version problem).
Nick
> Hi List, Hi Developers,
>
> a few days ago I switched our lab over to 3.0.4 from 3.0.3 (both
> Freesurfer-Linux-centos4_x86_64-stable-pub-v3.0.N-full versions,
> running on SuSE 10.1, x86_64). Here are my impressions:
>
> 1) Scuba and tksurfer now work out of the box, cool! (my system had
> freeglut problems)
>
> 2) fslview is missing; this script called fslview_exe (which is still
> around in the new version) this small script made sure the right
> libraries are accessible for flview_exe; I copied it over from v3.0.3
> and everything is fine. See below for a copy of the script. (I use
> fslview to fine tune bet). And another fsl related observation, the fsl
> version shipped is the 32bit one, maybe thr 64bit build might seem
> abetter fit for the 64bit freesurfer version.
>
> 3) the nice modification Doug made for mri_nu_correct.mni did not make
> it to 3.0.4. That is my download of 3.0.4 contains mir_nu_correct.mni v
> 1.3 2005/12/08 01:27:21, instead of v 1.5 2006/11/03 19:59:55. I just
> copied the modified version from 3.0.3 over; it works fine and looks
> better with my single channel surface coil recons.
> 4) it is a really great tool, thanks for all the work and especially
> the support on this list.
>
> aloha
> Sebastian
>
>
> ----- cut me -----
> #!/bin/sh
>
> LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${FSLDIR}/lib
> export LD_LIBRARY_PATH
>
> $FSLDIR/bin/fslview_exe $@
>
> ------ cut me -----
> --
> Sebastian Moeller
>
> Tel.: 04 21 - 2 18 - 78 38 oder 96 91
> Fax.: 04 21 - 2 18 - 90 04
> GSM: 01 62 - 3 25 45 59
> [EMAIL PROTECTED]
>
> AG Kreiter / FB 2
> Institut fuer Hirnforschung III
> Abteilung Theoretische Neurobiologie
> Universitaet Bremen
> Biogarten
> Hochschulring 16a
> Postfach 33 04 40
> 28359 Bremen
>
>
> _______________________________________________
> Freesurfer mailing list
> [email protected]
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>
>
_______________________________________________
Freesurfer mailing list
[email protected]
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
