Hi,

 

What was the exact command you were trying to run?

 

Jenni

  _____  

From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Wang, Xin
Sent: Thursday, May 03, 2007 12:18 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] problem of group analysis

 

Hello, Group

I have a question about mri_glmfit. I can not run this commend on my data. 

An error 

"MatrixReadTxT: could not scan value [1] [2] 

file exists

ERROR: loading C age.mat" 

appeared. 

I do not know what is wrong. 

The only warning I saw is "ERROR: cound not find volume
$SUBJECTS_DIR/average/surf/../mri/orig. Does it exist?" when I ran
mri_surf2surf.  

 

I am doing group comparison of cortical thickness on 2X2 data. The following
is my fsgd.txt 

 and *.mat.

 

GroupDescriptorFile 1

Title thick vs group

Class group1

Class group2

Variables age

Input APL02R700 group1 48

Input APN02G650 group1 35

Input APN02G700 group2 35 

Input APN03L700 group2 30

DefaultVariable age

age.mat: -1, 1, 0

If anyone know what is wrong in my analysis, please help.

Thank you in advance,

 

Xin 

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