I don't think the image was attached.
doug
Earl Zastrow wrote:
Here's the command line and screen output:
[EMAIL PROTECTED] SE1]recon-all -i EXP0001.dcm -s anon2
INFO: SUBJECTS_DIR is /home/uwcem/cpratoom/FSFsubjects
Actual FREESURFER_HOME
/opt/ecco/software/commercial/freesurfer/4.0.1/i686/linux
Linux uwcemif 2.6.14-hardened-r2 #1 PREEMPT Fri Dec 30 01:40:29 CST
2005 i686 Intel(R) Pentium(R) 4 CPU 1.70GHz GenuineIntel GNU/Linux
/home/uwcem/cpratoom/FSFsubjects/anon2
mri_convert /home/uwcem/cpratoom/BrainMRI/PA2/SE1/EXP0001.dcm
/home/uwcem/cpratoom/FSFsubjects/anon2/mri/orig/001.mgz
mri_convert /home/uwcem/cpratoom/BrainMRI/PA2/SE1/EXP0001.dcm
/home/uwcem/cpratoom/FSFsubjects/anon2/mri/orig/001.mgz
file not found or unknown file type for file
/home/uwcem/cpratoom/BrainMRI/PA2/SE1/EXP0001.dcm
Linux uwcemif 2.6.14-hardened-r2 #1 PREEMPT Fri Dec 30 01:40:29 CST
2005 i686 Intel(R) Pentium(R) 4 CPU 1.70GHz GenuineIntel GNU/Linux
recon-all exited with ERRORS at Wed Nov 7 06:54:51 CST 2007
I also used mri_probedicom and obtained the following:
[EMAIL PROTECTED] SE1]mri_probedicom --i EXP0001.dcm
ERROR: EXP0001.dcm is not a dicom file
The image in question (EXP0001.dcm) is attached with this email.
Thanks.
Earl
Bruce Fischl wrote:
can you send us your entire command line?
On Tue, 6 Nov 2007, Earl Zastrow wrote:
Hi,
I'm a new user and I'm having problem with some of the dicom data
sets I have. Namely, I got the following error message when I try to
convert some of the data sets to .mgz:
file not found or unknown file type for file
/home/uwcem/cpratoom/BrainMRI/PA2/SE1/EXP0001.dcm
I looked at the dicom info of EXP0001.dcm and discovered that the
Manufacturer field is blank, compare to the one that did convert to
.mgz without errors. Does that have anything to do with the error
that I got? Thank you for your time.
Regards,
Earl Zastrow
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MGH-NMR Center
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