Jose, The mris_anatomical_stats command that you show is correct.
For wm values, try using mri_segstats (--help), using wmparc.mgz as input, and the --slabel arg. Nick On Thu, 2009-04-02 at 16:07 +0200, Jose Luis Cantero Lorente wrote: > Hi, > > I would like to obtain gray matter volume (not thickness) values for several > new cortical ROIs that I have created with tkmedit, but to my knowledge this > is not straight-forward with Freesurfer. We have tried this option: > > mris_anatomical_stats -l ?h.name.label <subject > > > Is that correct for my purpose? Could anybody tell me if there is another > more correct way to aim this goal by using Freesurfer? > > How can I get the white matter volume values for the same ROIs? > > Any help would be very welcome. > > Best, > Jose > > --- > Jose Luis Cantero, Ph.D. > Laboratory of Functional Neuroscience > Department of Physiology, Anatomy, and Cellular Biology > University Pablo de Olavide > Ctra. de Utrera, Km.1 > 41013 - Sevilla > - Spain - > > Phone: +34 954 977433 > Fax: +34 954 349151 > Email: [email protected] > http://www.upo.es/neuroaging/es/ > > _______________________________________________ > Freesurfer mailing list > [email protected] > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list [email protected] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
