sure, just run mri_convert on the brainmask.mgz and give the output volume the .nii extension

cheers
Bruce

On Thu, 4 Jun 2009, Jose Luis Cantero Lorente wrote:

Dear Freesurfers,

is it feasible to save to nii the MR images after stripping the skull in 
Freesurfer? If so, please let me know how to do it.

Thanks in advance.

Best,
Jose

---
Jose Luis Cantero, Ph.D.
Laboratory of Functional Neuroscience
Department of Physiology, Anatomy, and Cellular Biology
University Pablo de Olavide
Ctra. de Utrera, Km.1
41013 - Sevilla
- Spain -

Phone: +34 954 977433
Fax: +34 954 349151
Email: jlcan...@upo.es
http://www.upo.es/neuroaging/es/

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