0 1 1 will just be the mean of the slopes of var1 and var2. Looks like 
you want 0 1 -1 to look for the interaction.

doug

Victoria Williams wrote:
> Hello,
>
> I apologize if this is a very simple question, but how would you set up a 
> contrast matrix to look at the interaction of 2 variables on a measure? 
> For example, my fsgd file contains:
>
> class=1
> variables=2
> Input Subjid class var1 var2
>
> When I tried using a contrast of 0_1_1 the significance map looks very 
> similar to the glm run only containing var1 (contrast_0_1). I thought 
> 0_1_1 was correct, but now I'm not so sure and would like to double check. 
> What I am interested in is how the interaction of var1 and var2 is 
> correlated with the brain measure per voxel. Is this possible with 
> mri_glmfit?
>
> I've checked the tutorials and scoured the internet as not to ask any
> silly questions, but I'm having trouble finding anything helpful.
>
> Thanks in advance!
> Tori
> _______________________________________________
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> Freesurfer@nmr.mgh.harvard.edu
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>
>
>   

-- 
Douglas N. Greve, Ph.D.
MGH-NMR Center
gr...@nmr.mgh.harvard.edu
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Fax: 617-726-7422

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