Hi Doug, Returning to this old thread: I'm doing what you said and getting weird results (activation not where I think it should be):
mri_vol2vol --mov <MNI152 template> --targ <fsaverage source> --inv --reg $FREESURFER_HOME/average/mni152.register.dat --o <output MNI volume> --no-save-reg Can you give an example of the command you would use? Thanks, Yigal Douglas N Greve wrote: > Use $FREESURFER_HOME/average/mni152.register.dat and mri_vol2vol with > --inv > > Yigal Agam wrote: >> Hi, >> >> What's the best way to convert an fsaverage volume into an MNI152 >> volume that can be viewed on top of a standard brain >> (MNI152_T1_2mm_brain.nii.gz) in fslview? >> >> Thanks, >> Yigal >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
