Hi everyone, I am using freesurfer version 4.5.0, and have just gotten an error message that I have never received before. The end of the recon-all script is pasted below. what does this mean?
#...@# Skull Stripping Mon Apr 5 15:06:52 EDT 2010 /home/fs01/kab2003/FS/133_S_0525/mri mri_watershed -T1 T1.mgz brainmask.auto.mgz Mode: T1 normalized volume ********************************************************* The input file is T1.mgz The output file is brainmask.auto.mgz If this is incorrect, please exit with CTL-C *************************WATERSHED************************** Sorting... T1-weighted MRI image modification of the preflooding height to 15 percent Count how many 110 voxels are present : 20676 Find the largest 110-component... heap usage = 128720 Kbytes. removing small segments (less than 1 percent of maxarea).done And identify it as the main brain basin...done Main component: 6553 voxels first estimation of the COG coord: x=124 y=177 z=184 r=110 first estimation of the main basin volume: 5673266 voxels mri_watershed Error: Problem with WM_MIN too small Linux compute-3-14.v4linux 2.6.18-164.6.1.el5 #1 SMP Tue Oct 27 11:28:30 EDT 2009 x86_64 x86_64 x86_64 GNU/Linux recon-all exited with ERRORS at Mon Apr 5 15:06:54 EDT 2010 Thanks, Dana
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