make_average_surface is not using the latest atlas when creating the .annot files. below is a link to a fixed version of make_average_surface which you should copy to your $FREESURFER_HOME/bin directory.
doug ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/make_average_surface wanlin wrote: > HI, > I am using freesurfer4.5.0. After processed using recon-all, > the ?aparc.annot of each subject contains 36 ROIs (including insula), > However the ?aparc.annot of average subject ( make_average_subject) > only has 35 ROIs(without insula). Did i do anything wrong or it is a > bug? Thanks. > > > > ------------------------------------------------------------------------ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
