Hi Lena, I'm not sure there's much point. You might be better off just using mri_label2label to propagate the PALS labels to other subjects.
cheers Bruce On Sat, 18 Dec 2010, Lena Palaniyappan wrote: > > Is it legit to create a .gcs file using fsaverage as the sole subject for the > PALS parcellations? > > I intend to use this .gcs to mri_ca_label all my subjects. > > Please advise, > > Lena > > On 18/12/2010 13:57, "Lena Palaniyappan" <lena.palaniyap...@nottingham.ac.uk> > wrote: > > I want to use the annot file for lobar areas in fsaverage to be mapped onto > all of my subjects. As I don't want to disassemble the annot to single labels > but generate lobar.annot for all subjects, I intend to use > mris_ca_label -l fsaverage/label/lh.PALS_B12_Lobes.annot <subjid> lh > lh.sphere.reg <classifier> subjid/label/lh.PALS_Lobes.annot > > For this purpose. > > What cortical classifier file should I use to map the different PALS atlases > (at least - the two of them : Brodmann and Lobes) > > Cheers > Lena > > _______________________________________________________ > Lena Palaniyappan > Clinical Lecturer & Honorary StR | Division of Psychiatry ( University of > Nottingham) > South Block 'A' floor| Queens Medical Centre | Nottingham | NG7 2UH > > > > This message and any attachment are intended solely for the addressee and may > contain confidential information. If you have received this message in error, > please send it back to me, and immediately delete it. Please do not use, > copy or disclose the information contained in this message or in any > attachment. Any views or opinions expressed by the author of this email do > not necessarily reflect the views of the University of Nottingham. > > This message has been checked for viruses but the contents of an attachment > may still contain software viruses which could damage your computer system: > you are advised to perform your own checks. Email communications with the > University of Nottingham may be monitored as permitted by UK legislation. > > > _______________________________________________________ > Lena Palaniyappan > Clinical Lecturer & Honorary StR | Division of Psychiatry ( University of > Nottingham) > South Block 'A' floor| Queens Medical Centre | Nottingham | NG7 2UH > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
