i havent used mnc2nii. you can use mri_convert: mri_convert filename.mnc filename.nii
(or filename.nii.gz to gzip it) n. On Tue, 2011-01-25 at 21:51 -0500, Alexander Zaitsev wrote: > Hello: > When I am trying to convert mnc file into nifti, the mnc2nii converter > gives me an error > $FREESURFER_HOME/mni/bin/mnc2nii fileName.mnc fileName.nii > "Can't find input file fileName.mnc" > > Prepending a whole path to the file name does not help - same error message > > I am using FreeSurver 5.0.0 (MAC/Darwin/i686) build > > Any suggestions? > > Thank you, > Alex Zaitsev > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
