There is a tag in this file that our DICOM reader does not recognize: 280092 DCM Unrecognized VR code (??) in readVRLength
Unfortunately, we're using a 3rd party dicom reader that is quite brittle, and I don't know a way around it. Can you convert to nifti using MRIcro and then use mri_convert to convert to mgz? doug Gabriel Go.Es. wrote: > > Dear FS users > > I'm using FS v5 to convert some dicom images to mgz running the comand: > > mri_convert -it dicom -ot mgz 000001.DCM 001.mgz > > And get the error: > > ERROR: > /root/trabajo/freesurfer/subjects/sujeto1/mri/orig/MPRAGE1/000001.DCM > is not a dicom file > > But when I try to open the file in MRIcro it is a dicom (philips) file > (see attached file), can any one help me with this? > > Regards, > Gabriel > > > > ------------------------------------------------------------------------ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
