Hi Bruce: Thanks you very much for your answer... And, how can I get the volume of the new segmentation of the CC that I got with mri_cc command ?...
Sincerely, Gonzalo Rojas Costa El 15-03-2011 21:27, Bruce Fischl escribió: > I mean that if the volume is rotated in any 2d slice it can look as if > only some of the cc is properly labeled, even if the full 3d labeling is > correct > On Tue, 15 Mar 2011, Gonzalo Rojas Costa wrote: > >> Hi Bruce; >> >> I don't understand why you said that in 3D the labeling is usually >> correct... ???... >> >> Sincerely, >> >> >> Gonzalo Rojas Costa >> >> >> >> El 15-03-2011 15:33, Bruce Fischl escribió: >>> Hi Gonzalo >>> >>> mri_cc computes the optimal rotation. If the patient's head is not >>> straight this can make it look like an inconsistent labeling, but in 3d >>> it usually is correct. >>> >>> Bruce >>> >>> On Tue, 15 Mar 2011, Gonzalo Rojas Costa wrote: >>> >>>> Hi: >>>> >>>> The CC_Posterior, CC_Central, etc, volumes in "aseg.mgz" are the >>>> complete CC volume, or it includes only some sagital slices ?... >>>> >>>> How can I meassure the CC volume for some sagital slices only (5 in >>>> total for example) ?... When I tried using "mri_cc" I got an error >>>> (for example) in the case that the patient is slightly rotated >>>> (freesurfer segments only one section of the CC as CC and the other as >>>> WM)... >>>> >>>> Sincerely, >>>> >>>> >>>> >>>> Gonzalo Rojas Costa >>>> Laboratory for Advanced Medical Image Processing >>>> Department of Radiology >>>> Las Condes Clinic >>>> Lo Fontecilla 441, Las Condes, Santiago, Chile. >>>> Tel: 56-2-2105170 >>>> Cel: 56-9-97771785 >>>> www.clc.cl >>>> >>>> >>>> >>> >>> >>> The information in this e-mail is intended only for the person to whom >>> it is >>> addressed. If you believe this e-mail was sent to you in error and the >>> e-mail >>> contains patient information, please contact the Partners Compliance >>> HelpLine at >>> http://www.partners.org/complianceline . If the e-mail was sent to you >>> in error >>> but does not contain patient information, please contact the sender and >>> properly >>> dispose of the e-mail. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
