The files have been dropped.
https://www.nmr.mgh.harvard.edu/facility/filedrop/showgroup/24787/1/d2a16267b417faa9da6f7cff3c36228a
On Wed, Jun 22, 2011 at 13:21, Bruce Fischl <fis...@nmr.mgh.harvard.edu>wrote:
> if you file drop these volumes we'll take a look
> Bruce
>
> On Wed, 22 Jun 2011, G. William Chapman IV wrote:
>
> Hello all,
>> I'm attempting to use mri_convert in order to match the slice size and
>> thickness of T2 and PD images to the Freesurfer T1 images, after
>> converting
>> the norm.mgz and the T2/PD images to .nii.gz. For the T2 I'm using:
>>
>> mri_convert ${SUBJECT}/T2/T2.nii.gz -rl ${SUBJECT}/mri/norm.nii.gz
>> --like
>> ${SUBJECT}/mri/norm.nii.gz ${**SUBJECT}/T2/T2_like_norm.nii.**gz
>>
>> And having no problems. However, using the same code for the PD images I'm
>> arriving at a bus error each time (output below). Is there any possible
>> work
>> around for this?
>>
>> (freesurfer-Darwin-leopard-**i686-stable-pub-v5.0.0)
>>
>> ---
>>
>> bash-3.2$ mri_convert ${SUBJECT}/PD/PD.nii.gz -rl
>> ${SUBJECT}/mri/norm.nii.gz
>> --like ${SUBJECT}/mri/norm.nii.gz ${SUBJECT}/PD/PD_like_norm.**nii.gz
>>
>> mri_convert 003_S_0907_M00/PD/PD.nii.gz -rl 003_S_0907_M00/mri/norm.nii.gz
>> --like 003_S_0907_M00/mri/norm.nii.gz 003_S_0907_M00/PD/PD_like_**
>> norm.nii.gz
>>
>> $Id: mri_convert.c,v 1.166.2.2 2010/08/10 19:11:50 greve Exp $
>>
>> reading from 003_S_0907_M00/PD/PD.nii.gz...
>>
>> TR=3000.00, TE=0.00, TI=0.00, flip angle=0.00
>>
>> i_ras = (-1, 2.05103e-10, 0)
>>
>> j_ras = (-2.05103e-10, -1, 0)
>>
>> k_ras = (-0, -0, 1)
>>
>> reading template info from volume 003_S_0907_M00/mri/norm.nii.**gz...
>>
>> INFO: transform src into the like-volume: 003_S_0907_M00/mri/norm.nii.gz
>>
>> Bus error
>>
>>
>>
>>
>>
>>
>
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