Hi Bill,
what portions are you talking about? recon-all shouldn't use any matlab.

cheers
Bruce
On 
Tue, 19 Jul 2011, Bill Taylor wrote:

> So I peaked in archive and did not get a hit.
>
> The situation is that the University of Wisconsin
> Madison site license prohibits us running Matlab
> in a cluster unless it is compiled.
>
> I am assisting a Neurology lab with having a Condor
> workflow which this time round will do both Matlab
> and FSL post processing.
>
> To compile the Matlab one needs to compile the
> entry points. But to run it, we'd have to change how it is called.
>
> Anyone have pointers for me?
>
> Bill Taylor
> Center for High Throughput Computing
> Condor Project
> Computer Sciences
> University of Wisconsin, Madison
> 608-219-4430
>
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>
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