Hi Judit - Hard to tell what could've gone wrong but you can try running
the postprocessing yourself as follows:
bedpostx_postproc.sh /path/to/subject/dmri
Hope this helps,
a.y
On Thu, 8 Sep 2011, Judit Haasz wrote:
> Hi,
>
> I am running bedpostx within Freesurfer Tracula with default settings.
> I got the following error message:
>
> Queuing post processing stage
> [: 223: NONE: unexpected operator
> [: 314: NONE: unexpected operator
> [: 327: xbedpostx_post: unexpected operator
> [: 486: x: unexpected operator
> [: 486: -le: argument expected
>
> For some reason the bedpostX process DOES NOT appear
> to have successfully completed. Please examine your
> results carefully.
>
> Below the individual slice folder I have the followings: dyads1.nii.gz,
> logfile, mean_f2samples.nii.gz, th2samples.nii.gz, dyads2.nii.gz,
> mean_S0samples.nii.gz ph1samples.nii.gz, f1samples.nii.gz,
> mean_dsamples.nii.gz, ph2samples.nii.gz, f2samples.nii.gz ,
> mean_f1samples.nii.gz, th1samples.nii.gz. But I miss all the 3 and 4D
> volume below bedpostx dir. Is it possible that only the postprocessing
> step went wrong?
> Thanks for your help.
> Best regards,
> Judit Haasz, MD
> Neuroinformatics and Image Analysis Group, UiB, Norway
>
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>
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