Hi Shige - See $FREESURFER_HOME/FreeSurferColorLUT.txt. a.y
On Fri, 7 Oct 2011, Shigetoshi Takaya wrote: > Dear FreeSurfers, > > In aparc+aseg file, each segmented or parceled region seems to be labeled by > its own intensity (e.g. the intensity is 53 in the right hippocampus, 10 in > the left thalamus...) when I see it on FSL viewer. > > Where can I find the table that shows the relationship between the intensity > and the name of brain region? I want to extract the specific brain regions > (e.g. parahippocampal gyrus, fusiform gyrus...) from the result of > aparc+aseg, and use them for the seed mask or the termination mask in > structural connectivity analysis (tractography). > > I appreciate your help. > > Thank you, > Shige > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
