Hi, I am not sure if your question is about read_annotation or aparc.annot in particular.
read_annotation.m reads the labels embedded in the annotation file you passed to it. The labels embedded in the annotation file may or may not be the same as those in FreeSurferColorLUT. I could be wrong, but in the case of aparc.annot generated by recon-all, I don't think the labels correspond to those in FreeSurferColorLUT. --Thomas On Thu, Dec 22, 2011 at 6:23 PM, Martijn Steenwijk <[email protected]> wrote: > Dear all, > > I'm trying to read aparc.annot into Matlab using the > matlab/read_annotation.m function. Is it correct that the labels read by > this function do not correspond with for example the FreeSurferColorLUT? > > Are the labels stored as 16 bit (unsigned)integers, or in another way? > > Best, > Martijn > > _______________________________________________ > Freesurfer mailing list > [email protected] > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > _______________________________________________ Freesurfer mailing list [email protected] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
