Hi Jackie,
What is the size of the *resample* files? The only thing I can think about
is that the files are corrupted and the code cannot read those files in.
You could try to read the resampled files into Freeview, to test whether
they can be opened or you could delete the files and then they will be
regenerated.
--Lilla
On Thu, 19 Apr 2012, Jackie Leung wrote:
ok... please see attached.
note: The directory name is different in this log file, but the error is the
same. I've been testing this problem with many different directories.
thanks,
jackie
On Thu, Apr 19, 2012 at 5:37 PM, Lilla Zollei <lzol...@nmr.mgh.harvard.edu>
wrote:
Hi Jackie,
Could you attach the log file?
Thanks, Lilla
On Thu, 19 Apr 2012, Jackie Leung wrote:
hi,
I'm trying to run mri_cvs_register and I'm getting a strange error
message.
MRISread(CVS_test_26to47_1/lh.resample.white): could not open file
No such file or directory
Error reading surface CVS_test_26to47_1/lh.resample.white
I've checked the directory and the file definitely exists.
It seems to be popping up in step 2 of the script, where it calls
the surf2vol function. I've tried running this function on its own and didn't
get this error, so I'm really confused as to what the problem may be.
Any help will be greatly appreciated!
thanks,
jackie
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Jackie Leung
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Hospital for Sick Children
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