How do I check this? (Apologies for my ignorance.) So I might need to just use a different set of dicoms then?
thanks, Mia ________________________________________ From: Allison Stevens Player [astev...@nmr.mgh.harvard.edu] Sent: Monday, May 14, 2012 1:02 PM To: Borzello, Mia Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] "cannot allocate memory" issue It looks like there is too huge a topology error for it to continue: CORRECTING DEFECT 23 (vertices=143258, convex hull=19937) Excessive topologic defect encountered: could not allocate -729782272 edges for retessellation Cannot allocate memory I would suggested looking at the filled.mgz to make sure skull and/or cerebellum are not included. Allison On Mon, 14 May 2012, Borzello, Mia wrote: > Hi all, > > I was wondering if you could help me figure out why the recon isn't running > to completion. I've attached the log file (recon-all.log), but it's unclear > to me what I should do to fix this problem. I tried to compute the lh.pial, > but I guess it was never made in the recon. > > Thanks so much, > Mia > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
