Hi Sam
I guess I don't understand what you want. You have some vertices that are
not labeled because you don't want them to be, but others that are not
labeled but you do want them to be?
Bruce
On Wed, 30 May 2012, Sam Carpenter
wrote:
Hi,
To clarify, we don¹t have a complete parcellation scheme. It looks like
that command requires an .annot file. If I'm not mistaken, this script
does not appear to assign them all to a label but to other existing
labels.
We have a collection of .label files that have we are unable to convert to
a .annot file >>> it appears that it does not work because not all of the
vertices are assigned by our labels. We're looking for a straightforward
solution to assigning these unlabeled vertices to their own label.
- Thanks so much for the quick reply though Bruce!
On 5/30/12 2:33 PM, "Bruce Fischl" <[email protected]> wrote:
Hi Sam
from the tksurfer tcl interface you can call
% read_and_smooth_parcellation <parc name> <lut name> <siter> <miter>
where siter is the number of soap bubble smoothing iterations that will
fill in the holes, and miter are the # of mode filter iterations that
will
smooth out rough edges.
cheers
Bruce
On Wed, 30 May 2012,
Sam Carpenter wrote:
Hi all,
We have a series of labels (over 100) that encompass the majority of the
cortex, but some minute vertices remained unlabeled. We've tried
several
attempts to make this .annot file and as well as attempts to label the
unlabeled vertices (from a previous post 'labeling unlabeled
vertices..').
But still to no avail.
Question: how to convert .label files to .annot file, when some
vertices
are still unassigned.
Thanks!!!
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