nothing happens when typing "which mris_prepoc", command not found when typing only "mris_preproc" ________________________________________ Von: Bruce Fischl [fis...@nmr.mgh.harvard.edu] Gesendet: Dienstag, 5. Juni 2012 15:25 Bis: Richter, Julia Cc: freesurfer@nmr.mgh.harvard.edu Betreff: Re: AW: [Freesurfer] mris_preproc
okay, how about: which mris_preproc and just mris_preproc On Tue, 5 Jun 2012, Richter, Julia wrote: > after typing your command in my terminal window, it appears: > > /usr/local/freesurfer/bin/mris_preproc > ________________________________________ > Von: Bruce Fischl [fis...@nmr.mgh.harvard.edu] > Gesendet: Dienstag, 5. Juni 2012 15:05 > Bis: Richter, Julia > Cc: freesurfer@nmr.mgh.harvard.edu > Betreff: Re: [Freesurfer] mris_preproc > > Hi Julia > > that seems unlikely. What happens when you type: > > ls $FREESURFER_HOME/bin/mris_preproc > > cheers > Bruce > On Tue, 5 Jun 2012, > Richter, Julia wrote: > >> Could it be that the mris_preproc and the mri_glmfit file are missing in my >> freesurfer package? If so, can anybody send them to me? >> >> Thank you very much, >> >> Julia >> ________________________________ >> Von: Richter, Julia >> Gesendet: Dienstag, 5. Juni 2012 10:11 >> Bis: freesurfer@nmr.mgh.harvard.edu >> Betreff: mris_preproc >> >> Dear FreeSurfer experts, >> >> I am trying to run mris_preproc after caching my data. As command lines, I >> am typing: >> >> mris_preproc --fsgd file.fsgd \ >> --cache-in thickness.fwhm10.fsaverage \ >> --target fsaverage --hemi lh \ >> --out lh.allpatients.thickness10.mgh >> >> Everytime I am trying to run these commands, it tells me that it does not >> know the command mris_preproc. I have no clue what is going on here. Any >> suggestions? >> >> Thanks for your help, >> >> best >> Julia >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
