Hi Bruce, That actually seems to do the trick. Thank you very much!
Best, Anders 2012/6/12 Bruce Fischl <[email protected]> > try symlinking the ?h.white surfaces to the ?h.smoothwm and see if that > solves your problem > > cheers > Bruce > > On Tue, 12 Jun 2012, Anders Hougaard wrote: > > Dear Dr. Bock, >> I get the same error in FS 5.1.0 when running recon-all -s <subject> >> -label_v1. >> >> Did you find a solution? >> >> Best regards, >> >> Anders Hougaard, MD >> Danish Headache Center >> Dept. of Neurology >> Glostrup Hospital >> Copenhagen >> Denmark >> >> 2011/11/11 Andrew Bock <[email protected]> >> Hello, >> >> I am having a similar problem to one described on the freesurfer >> mail archive, where I receive the following error when trying to >> identify V1 using the Hinds method (i.e. recon-all -s <subject> >> -label_v1): >> >> processing subject V1_average... >> MRISreadVertexPosition(white): could not open file >> /usr/local/freesurfer/**subjects/V1_average/surf/rh.**white >> No such file or directory >> MRISreadOriginalProperties: could not read surface file white >> No such file or directory >> could not read surface positions from white >> No such file or directory >> >> >> As Prof. Krish Singh indicated in July, it appears the problem >> occurs when trying to open rh.white (or lh.white) from the surf >> subdirectory in V1_average, which doesn't exist. >> >> I have run recon-all -s <subject> -make all, but it returns >> "make: Nothing to be done for `all'." >> >> Any help you can provide would be greatly appreciated! >> >> Thanks in advance, >> >> Andrew >> >> -- >> Andrew Bock, Ph.D. >> Department of Psychology >> University of Washington >> Seattle, WA 98195 >> Tel: 206.543.3817 >> Fax: 206.685.3157 >> [email protected] >> >> ______________________________**_________________ >> Freesurfer mailing list >> [email protected] >> https://mail.nmr.mgh.harvard.**edu/mailman/listinfo/**freesurfer<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> >> >> >> The information in this e-mail is intended only for the person to whom >> it is >> addressed. If you believe this e-mail was sent to you in error and the >> e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/**complianceline<http://www.partners.org/complianceline>. >> If the e-mail was sent to you >> in error >> but does not contain patient information, please contact the sender >> and properly >> dispose of the e-mail. >> >> >> >>
_______________________________________________ Freesurfer mailing list [email protected] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
