Hi bruce,
yes, mris_register solves the problem- i had to strugge a bit to see what
works if i wanted to use a specific subject's {hemi}.sphere file for use
in mri_glmfit. Thanks.
shantanuOn Fri, June 15, 2012 10:01 pm, Bruce Fischl wrote: > Hi Shantanu > What are you trying to register? I don't ink mri_register is what you > want. Possibly mris_register instead (note the "s")? > Cheers > Bruce > > > > > On Jun 15, 2012, at 8:32 PM, "Shantanu Ghosh" > <shant...@nmr.mgh.harvard.edu> wrote: > >> >> Hi Freesurfer experts, >> >> I am receiving an error message while processing registration to >> fsaverage >> using mri_register. >> >> Please tell me why it is happening and how to get this going. >> >> Here is the terminal output: >> >> glia:shantanu[219] mri_register >> /autofs/space/calvin_001/marvin/1/users/MRI/WMA/recons/AC058/mri/brainmask.mgz >> /autofs/space/glia_001/users/shantanu/tutcc/ddd/fsaverage/mri/brainmask.mgz >> AC058.reg.mgz >> reading 1 input volumes... >> logging results to AC058.reg.log >> reading input volume >> '/autofs/space/calvin_001/marvin/1/users/MRI/WMA/recons/AC058/mri/brainmask.mgz'... >> reading GCA >> '/autofs/space/glia_001/users/shantanu/tutcc/ddd/fsaverage/mri/brainmask.mgz'... >> gcaAllocMax: node dims 15 15 15 >> gcaAllocMax: prior dims 15 15 15 >> gcaAllocMax: max_labels 0 >> GCAread(/autofs/space/glia_001/users/shantanu/tutcc/ddd/fsaverage/mri/brainmask.mgz): >> could not allocate -136441340 labels @ (0,0,0) >> Cannot allocate memory >> >> >> Thanks in advance, >> Shantanu >> >> >> >> >> -- >> Shantanu Ghosh, Ph.D. >> Martinos Center for Biomedical Imaging >> Harvard-MIT Program in Health Sciences & Technology >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> > > > -- Shantanu Ghosh, Ph.D. Martinos Center for Biomedical Imaging Harvard-MIT Program in Health Sciences & Technology _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
