where did this file come from? Can you upload it to our file drop (URL at the end of this email)? doug
On 07/30/2012 01:51 AM, Liu Yawu wrote: > Hi Doug, > > Thanks for your reply. Here are the message: > > ERROR: > /home/d4201z/Desktop/im_3/1.3.12.2.1107.5.2.4.7668.20000829111709000005084.dcm > is not a dicom file or some other problem > > Entering IsDICOM > (/home/d4201z/Desktop/im_3/1.3.12.2.1107.5.2.4.7668.20000829111709000005084.dcm) > Opening > /home/d4201z/Desktop/im_3/1.3.12.2.1107.5.2.4.7668.20000829111709000005084.dcm > as part10 > DCM_FILEOPENFAILED > 280092 DCM Unrecognized VR code ( > ) in readVRLength > 20092 DCM failed to open file: > /home/d4201z/Desktop/im_3/1.3.12.2.1107.5.2.4.7668.20000829111709000005084.dcm > in DCM_OpenFile > Opening as littleendian > DCM_FILEOPENFAILED > Opening as bigendian > DCM_FILEOPENFAILED > Opening as format conversion > DCM_ILLEGALOPTION > Leaving IsDICOM > (/home/d4201z/Desktop/im_3/1.3.12.2.1107.5.2.4.7668.20000829111709000005084.dcm) > > ERROR: > /home/d4201z/Desktop/im_3/1.3.12.2.1107.5.2.4.7668.20000829111709000005084.dcm > is not a dicom file or some other problem > > Yawu > ________________________________________ > From: freesurfer-boun...@nmr.mgh.harvard.edu > [freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Douglas N Greve > [gr...@nmr.mgh.harvard.edu] > Sent: Friday, July 27, 2012 7:08 PM > To: freesurfer@nmr.mgh.harvard.edu > Subject: Re: [Freesurfer] problem when convert dcm to mgz > > Can you send the result of > mri_probedicom --i > /home/d4201z/Desktop/im_3/1.3.12.2.1107.5.2.4.7668.20000829111709000005084.dcm > > > doug > > > On 07/27/2012 05:38 AM, Liu Yawu wrote: >> Hi, >> I recently install Freesurfer under ubuntu. I tested two own data. It works >> in one our own case, but did not work for other cases. The problem is the >> Freesurfer "not found or unknown file type for file >> /home/d4201z/Desktop/im_4/20001108150735000005086.dcm" when convert convert >> dcm to mgz. Any helps are appreciated! >> >> Here are detailed inf: >> >> >> FREESURFER_HOME: /usr/local/src/freesurfer >> >> Build stamp: freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0 >> >> Debian version: wheezy/sid >> >> Kernel info: Linux 3.2.0-27-generic x86_64 >> >> >> 1. the entire command-line executed >> recon-all -s APauli \ >> -i >> /home/d4201z/Desktop/im_3/1.3.12.2.1107.5.2.4.7668.20000829111709000005084.dcm >> >> 2. the error message generated >> >> file not found or unknown file type for file >> /home/d4201z/Desktop/im_3/1.3.12.2.1107.5.2.4.7668.20000829111709000005084.dcm >> >> >> 3. the subject's /script/recon-all.log >> >> Fri Jul 27 12:20:31 EEST 2012 >> /usr/local/src/freesurfer/subjects/APauli >> /usr/local/src/freesurfer/bin/recon-all >> -s APauli -i >> /home/d4201z/Desktop/im_3/1.3.12.2.1107.5.2.4.7668.20000829111709000005084.dcm >> subjid APauli >> setenv SUBJECTS_DIR /usr/local/src/freesurfer/subjects >> FREESURFER_HOME /usr/local/src/freesurfer >> Actual FREESURFER_HOME /usr/local/src/freesurfer >> build-stamp.txt: freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0 >> Linux d4201z-CELSIUS-M470-2 3.2.0-27-generic #43-Ubuntu SMP Fri Jul 6 >> 14:25:57 UTC 2012 x86_64 x86_64 x86_64 GNU/Linux >> cputime unlimited >> filesize unlimited >> datasize unlimited >> stacksize 8192 kbytes >> coredumpsize 0 kbytes >> memoryuse unlimited >> vmemoryuse unlimited >> descriptors 1024 >> memorylocked 64 kbytes >> maxproc 95900 >> maxlocks unlimited >> maxsignal 95900 >> maxmessage 819200 >> maxnice 0 >> maxrtprio 0 >> maxrttime unlimited >> >> total used free shared buffers cached >> Mem: 12298252 2880484 9417768 0 127152 973356 >> -/+ buffers/cache: 1779976 10518276 >> Swap: 19529724 0 19529724 >> >> ######################################## >> program versions used >> $Id: recon-all,v 1.379.2.17 2011/05/20 22:48:18 nicks Exp $ >> $Id: mri_motion_correct.fsl,v 1.14 2011/03/02 20:16:39 nicks Exp $ >> mri_convert -all-info >> ProgramName: mri_convert ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:31-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mri_convert.c,v 1.179.2.2 2011/05/16 20:53:47 greve >> Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> FLIRT version 5.5 >> $Id: talairach_avi,v 1.9 2011/03/02 18:38:06 nicks Exp $ >> mri_convert --version >> stable5 >> ProgramName: tkregister2_cmdl ProgramArguments: --all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:31-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: tkregister2.c,v 1.121.2.1 2011/03/28 20:25:16 greve >> Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> Program nu_correct, built from: >> Package MNI N3, version 1.10, compiled by nicks@minerva >> (x86_64-unknown-linux-gnu) on 2010-02-20 at 17:32:37 >> ProgramName: mri_make_uchar ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:31-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mri_make_uchar.c,v 1.4 2011/03/02 00:04:14 nicks >> Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_normalize ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:31-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mri_normalize.c,v 1.73 2011/03/11 20:55:38 fischl >> Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_watershed ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:31-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mri_watershed.cpp,v 1.96 2011/03/16 21:23:49 nicks >> Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_gcut ProgramArguments: -all-info ProgramVersion: $Name: >> stable5 $ TimeStamp: 2012/07/27-09:20:31-GMT BuildTimeStamp: May 22 2011 >> 08:23:31 CVS: $Id: mri_gcut.cpp,v 1.14 2011/03/02 00:04:16 nicks Exp $ >> User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_segment ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:32-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mri_segment.c,v 1.40 2011/03/02 00:04:24 nicks Exp >> $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_label2label ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:32-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mri_label2label.c,v 1.40.2.1 2011/05/19 17:21:56 >> greve Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_em_register ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:32-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mri_em_register.c,v 1.84 2011/03/16 21:23:48 nicks >> Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_ca_normalize ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:32-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mri_ca_normalize.c,v 1.52 2011/03/02 00:04:14 nicks >> Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_ca_register ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:32-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mri_ca_register.c,v 1.78 2011/03/02 14:27:40 fischl >> Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_ca_label ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:32-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mri_ca_label.c,v 1.96 2011/03/02 00:04:13 nicks Exp >> $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_pretess ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:32-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mri_pretess.c,v 1.20 2011/03/02 00:04:23 nicks Exp >> $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_fill ProgramArguments: -all-info ProgramVersion: $Name: >> stable5 $ TimeStamp: 2012/07/27-09:20:32-GMT BuildTimeStamp: May 22 2011 >> 08:23:31 CVS: $Id: mri_fill.c,v 1.118 2011/03/16 21:23:49 nicks Exp $ >> User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_tessellate ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:32-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mri_tessellate.c,v 1.36 2011/03/02 00:04:25 nicks >> Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_concatenate_lta ProgramArguments: -all-info >> ProgramVersion: $Name: stable5 $ TimeStamp: 2012/07/27-09:20:32-GMT >> BuildTimeStamp: May 22 2011 08:23:31 CVS: $Id: mri_concatenate_lta.c,v 1.10 >> 2011/03/16 21:23:48 nicks Exp $ User: d4201z Machine: >> d4201z-CELSIUS-M470-2 Platform: Linux PlatformVersion: 3.2.0-27-generic >> CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_normalize_tp2 ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:32-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mri_normalize_tp2.c,v 1.8 2011/03/02 00:04:23 nicks >> Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mris_smooth ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:32-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mris_smooth.c,v 1.28 2011/03/02 00:04:34 nicks Exp >> $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mris_inflate ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:32-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mris_inflate.c,v 1.43 2011/03/02 00:04:32 nicks Exp >> $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mris_curvature ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:32-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mris_curvature.c,v 1.31 2011/03/02 00:04:30 nicks >> Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mris_sphere ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:32-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mris_sphere.c,v 1.57 2011/03/02 00:04:34 nicks Exp >> $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mris_fix_topology ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:32-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mris_fix_topology.c,v 1.48 2011/03/02 00:04:32 >> nicks Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mris_topo_fixer ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:32-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mris_topo_fixer.cpp,v 1.29 2011/03/02 00:04:34 >> nicks Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mris_ca_label ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:33-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mris_ca_label.c,v 1.35 2011/03/02 00:04:27 nicks >> Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mris_euler_number ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:33-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mris_euler_number.c,v 1.8 2011/03/02 00:04:32 nicks >> Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mris_make_surfaces ProgramArguments: -all-info >> ProgramVersion: $Name: stable5 $ TimeStamp: 2012/07/27-09:20:33-GMT >> BuildTimeStamp: May 22 2011 08:23:31 CVS: $Id: mris_make_surfaces.c,v 1.127 >> 2011/03/02 00:04:33 nicks Exp $ User: d4201z Machine: >> d4201z-CELSIUS-M470-2 Platform: Linux PlatformVersion: 3.2.0-27-generic >> CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mris_register ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:33-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mris_register.c,v 1.59 2011/03/02 00:04:33 nicks >> Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mris_volmask ProgramArguments: --all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:33-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mris_volmask.cpp,v 1.25 2011/03/02 00:04:34 nicks >> Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mris_anatomical_stats ProgramArguments: -all-info >> ProgramVersion: $Name: stable5 $ TimeStamp: 2012/07/27-09:20:33-GMT >> BuildTimeStamp: May 22 2011 08:23:31 CVS: $Id: mris_anatomical_stats.c,v >> 1.72 2011/03/02 00:04:26 nicks Exp $ User: d4201z Machine: >> d4201z-CELSIUS-M470-2 Platform: Linux PlatformVersion: 3.2.0-27-generic >> CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mrisp_paint ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:33-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mrisp_paint.c,v 1.11 2011/03/02 00:04:35 nicks Exp >> $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mris_curvature_stats ProgramArguments: -all-info >> ProgramVersion: $Name: stable5 $ TimeStamp: 2012/07/27-09:20:33-GMT >> BuildTimeStamp: May 22 2011 08:23:31 CVS: $Id: mris_curvature_stats.c,v >> 1.64 2011/03/02 00:04:30 nicks Exp $ User: d4201z Machine: >> d4201z-CELSIUS-M470-2 Platform: Linux PlatformVersion: 3.2.0-27-generic >> CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mris_calc ProgramArguments: -all-info ProgramVersion: $Name: >> stable5 $ TimeStamp: 2012/07/27-09:20:33-GMT BuildTimeStamp: May 22 2011 >> 08:23:31 CVS: $Id: mris_calc.c,v 1.37.2.4 2011/04/04 00:53:08 nicks Exp $ >> User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> $Id: mri_robust_register.cpp,v 1.52 2011/03/16 21:23:49 nicks Exp $ >> >> ProgramName: mri_robust_register ProgramArguments: -all-info >> ProgramVersion: $Name: stable5 $ TimeStamp: 2012/07/27-09:20:33-GMT >> BuildTimeStamp: May 22 2011 08:23:31 CVS: $Id: mri_robust_register.cpp,v >> 1.52 2011/03/16 21:23:49 nicks Exp $ User: d4201z Machine: >> d4201z-CELSIUS-M470-2 Platform: Linux PlatformVersion: 3.2.0-27-generic >> CompilerName: GCC CompilerVersion: 30400 >> $Id: mri_robust_template.cpp,v 1.37 2011/03/02 00:04:24 nicks Exp $ >> >> ProgramName: mri_robust_template ProgramArguments: -all-info >> ProgramVersion: $Name: stable5 $ TimeStamp: 2012/07/27-09:20:33-GMT >> BuildTimeStamp: May 22 2011 08:23:31 CVS: $Id: mri_robust_template.cpp,v >> 1.37 2011/03/02 00:04:24 nicks Exp $ User: d4201z Machine: >> d4201z-CELSIUS-M470-2 Platform: Linux PlatformVersion: 3.2.0-27-generic >> CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_and ProgramArguments: -all-info ProgramVersion: $Name: >> stable5 $ TimeStamp: 2012/07/27-09:20:33-GMT BuildTimeStamp: May 22 2011 >> 08:23:31 CVS: $Id: mri_and.c,v 1.4 2011/03/02 00:04:13 nicks Exp $ User: >> d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux PlatformVersion: >> 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_or ProgramArguments: -all-info ProgramVersion: $Name: >> stable5 $ TimeStamp: 2012/07/27-09:20:33-GMT BuildTimeStamp: May 22 2011 >> 08:23:31 CVS: $Id: mri_or.c,v 1.3 2011/03/02 00:04:13 nicks Exp $ User: >> d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux PlatformVersion: >> 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_fuse_segmentations ProgramArguments: -all-info >> ProgramVersion: $Name: stable5 $ TimeStamp: 2012/07/27-09:20:33-GMT >> BuildTimeStamp: May 22 2011 08:23:31 CVS: $Id: mri_fuse_segmentations.c,v >> 1.8 2011/03/02 00:04:15 nicks Exp $ User: d4201z Machine: >> d4201z-CELSIUS-M470-2 Platform: Linux PlatformVersion: 3.2.0-27-generic >> CompilerName: GCC CompilerVersion: 30400 >> ProgramName: mri_segstats ProgramArguments: -all-info ProgramVersion: >> $Name: stable5 $ TimeStamp: 2012/07/27-09:20:33-GMT BuildTimeStamp: May 22 >> 2011 08:23:31 CVS: $Id: mri_segstats.c,v 1.75.2.2 2011/04/27 22:18:58 nicks >> Exp $ User: d4201z Machine: d4201z-CELSIUS-M470-2 Platform: Linux >> PlatformVersion: 3.2.0-27-generic CompilerName: GCC CompilerVersion: 30400 >> ####################################### >> GCADIR /usr/local/src/freesurfer/average >> GCA RB_all_2008-03-26.gca >> GCASkull RB_all_withskull_2008-03-26.gca >> AvgCurvTif average.curvature.filled.buckner40.tif >> GCSDIR /usr/local/src/freesurfer/average >> GCS curvature.buckner40.filled.desikan_killiany.2010-03-25.gcs >> ####################################### >> /usr/local/src/freesurfer/subjects/APauli >> >> mri_convert >> /home/d4201z/Desktop/im_3/1.3.12.2.1107.5.2.4.7668.20000829111709000005084.dcm >> /usr/local/src/freesurfer/subjects/APauli/mri/orig/001.mgz >> >> mri_convert >> /home/d4201z/Desktop/im_3/1.3.12.2.1107.5.2.4.7668.20000829111709000005084.dcm >> /usr/local/src/freesurfer/subjects/APauli/mri/orig/001.mgz >> file not found or unknown file type for file >> /home/d4201z/Desktop/im_3/1.3.12.2.1107.5.2.4.7668.20000829111709000005084.dcm >> >> #------------------------------------------ >> >> recon-all -s APauli finished without error at Fri Jul 27 12:20:34 EEST 2012 >> >> Regards, >> Yawu >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
