I've just figured that out.....the storage device icon is on the desktop but
the actual path to the storage device is different....very silly
:-)
sorry for bothering....
2012/10/2 pietro de rossi <deross...@gmail.com>
Ok, this is what happened after I moved the folders to a storage
device (MacintoshHD2)
[HG-01881507-DM7:~] aitkenww% setenv SUBJECTS_DIR
/users/aitkenww/desktop/MacIntoshHD2/PROC_WILL
[HG-01881507-DM7:~] aitkenww% cd $SUBJECTS_DIR
/users/aitkenww/desktop/MacIntoshHD2/PROC_WILL: No such file or
directory.
[HG-01881507-DM7:~] aitkenww% tksurfer 348 lh inflated
subject is 348
hemi is lh
surface is inflated
surfer: current subjects dir:
/users/aitkenww/desktop/MacIntoshHD2/PROC_WILL
Checking 348
ERROR: cannot find subject 348 in
/users/aitkenww/desktop/MacIntoshHD2/PROC_WILL
[HG-01881507-DM7:~] aitkenww% tksurfer 348 lh inflated
subject is 348
hemi is lh
surface is inflated
surfer: current subjects dir:
/users/aitkenww/desktop/MacIntoshHD2/PROC_WILL
Checking 348
ERROR: cannot find subject 348 in
/users/aitkenww/desktop/MacIntoshHD2/PROC_WILL
2012/10/2 Bruce Fischl <fis...@nmr.mgh.harvard.edu>
Hi Pietro
you should be able to. When you say you can't run
tksurfer/tkmedit what happens? Can you send us screen
output?
Bruce
On Tue, 2 Oct 2012, pietro de rossi wrote:
Dear FreeSurfer experts,
I'm processing scans on three different computers
and I would like to know
if it is possible to collect all the processed scans
together in order to
analyze data on just one computer.
I realized that even moving the processed subjects
folders to another folder
within the same computer (even if I set the new
folder as the SUBJECTS_DIR)
I'm not able to run tksurfer and tkmedit for those
subjects....am I doing
anything wrong? is it just that once you've
processed the scans the
proc_folders cannot be moved?
thanks,
Pietro
--
Pietro De Rossi, MD
-------------------------------------
Sapienza Università di Roma, Facoltà di Medicina e
Psicologia, Dipartimento
NESMOS (Neuroscienze, Salute Mentale, Organi di
Senso), Ospedale
Sant'Andrea, Via di Grottarossa 1035-1039, 00189
Roma
NESMOS Department (Neurosciences, Mental Health and
Sensory Functions),
School of Medicine and Psychology, Sapienza University,
Sant?Andrea Hospital,
Via di Grottarossa 1035-1039, 00189 Rome, Italy
Neurobehavioral Clinical Research Section, Social and
Behavioral Research
Branch, National Human Genome Research Institute (NHGRI),
National
Institutes of Health (NIH), Bethesda, Maryland 20892, USA
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--
Pietro De Rossi, MD
-------------------------------------
Sapienza Università di Roma, Facoltà di Medicina e Psicologia,
Dipartimento NESMOS (Neuroscienze, Salute Mentale, Organi di Senso),
Ospedale Sant'Andrea, Via di Grottarossa 1035-1039, 00189 Roma
NESMOS Department (Neurosciences, Mental Health and Sensory
Functions), School of Medicine and Psychology, Sapienza University,
Sant?Andrea Hospital, Via di Grottarossa 1035-1039, 00189 Rome, Italy
Neurobehavioral Clinical Research Section, Social and Behavioral
Research Branch, National Human Genome Research Institute (NHGRI),
National Institutes of Health (NIH), Bethesda, Maryland 20892, USA
--
Pietro De Rossi, MD
-------------------------------------
Sapienza Università di Roma, Facoltà di Medicina e Psicologia, Dipartimento
NESMOS (Neuroscienze, Salute Mentale, Organi di Senso), Ospedale
Sant'Andrea, Via di Grottarossa 1035-1039, 00189 Roma
NESMOS Department (Neurosciences, Mental Health and Sensory Functions),
School of Medicine and Psychology, Sapienza University, Sant?Andrea Hospital,
Via di Grottarossa 1035-1039, 00189 Rome, Italy
Neurobehavioral Clinical Research Section, Social and Behavioral Research
Branch, National Human Genome Research Institute (NHGRI), National
Institutes of Health (NIH), Bethesda, Maryland 20892, USA
