Hi Chris, the problem is that you do not have FSLDIR defined. Assuming you have FSL installed, then setenv FSLDIR /place/where/fsl/is/installed
doug On 11/06/2012 09:09 PM, Chris McNorgan wrote: > Hi Doug, > > Attached are two plain-text files: fslog2.txt contains the redirected > terminal output after executing: > preproc-sess -s sub00294 -fsd rest -per-run -surface self lhrh -mni305 > -fwhm 0 &> ~/fslog2.txt > > 294files.txt contains the output of `find` for all files in the > project directory related to this participant *after* executing > preproc-sess, in case any clue can be found in this information (I > omitted files in the log/ directory). > > > Thanks, > Chris -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
