It should be in the current directory. doug On 11/19/2012 12:47 PM, pietro de rossi wrote: > Hi FreeSurfer users and developers, > > I'm trying to export aseg.stats values for a preliminary analysis. I > would like to export them to an excel spreadsheet. > > My command line was > > asegstats2table --subjects 119 123 125 135 141 145 146 147 151 159 160 > 163 164 167 171 174 178 186 196 198 218 221 224 225 226 227 228 229 > 244 249 250 269 271 280 282 296 303 305 308 311 320 324 327 328 334 > 335 338 339 340 343 344 345 349 352 355 360 361 373 379 382 384 386 > 387 388 393 394 398 399 415 430 443 450 459 461 464 465 482 501 509 > 515 522 525 544 577 586 597 599 636 646 681 745 792 800 830 886 > --tablefile aseg.vol.sample.table --skip > > I get this > > Parsing the .stats files > Skipping /users/derossip/desktop/Subjects_ABC_Proc/386/stats/aseg.stats > Skipping /users/derossip/desktop/Subjects_ABC_Proc/464/stats/aseg.stats > Skipping /users/derossip/desktop/Subjects_ABC_Proc/482/stats/aseg.stats > Skipping /users/derossip/desktop/Subjects_ABC_Proc/501/stats/aseg.stats > Building the table.. > Writing the table to aseg.vol.sample.table > > Now....where can I physically visualize the data? > > Thank you verymuch, > > Pietro > > -- > Pietro De Rossi, MD > ------------------------------------- > Sapienza Università di Roma, Facoltà di Medicina e Psicologia, > Dipartimento NESMOS (Neuroscienze, Salute Mentale, Organi di Senso), > Ospedale Sant'Andrea, Via di Grottarossa 1035-1039, 00189 Roma > > NESMOS Department (Neurosciences, Mental Health and Sensory > Functions), School of Medicine and Psychology, Sapienza University, > Sant’Andrea Hospital, Via di Grottarossa 1035-1039, 00189 Rome, Italy > > Neurobehavioral Clinical Research Section, Social and Behavioral > Research Branch, National Human Genome Research Institute (NHGRI), > National Institutes of Health (NIH), Bethesda, Maryland 20892, USA > > > _______________________________________________ > Freesurfer mailing list > [email protected] > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center [email protected] Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list [email protected] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
