then I would either use TRACULA (if you have DWI) or the wmparc to generate ROIs. I meant that you could count whether there are more lh or rh wm labels neighboring each one to figure out which hemi they are in

cheers
Bruce


On Wed, 12 Dec 2012, Gabriel Gonzalez Escamilla wrote:

Yes I did loo at the total WH-hypointensities(77), and substract them without a 
problem.

What do you mean with lateralize them based on neighboring labels? How can I 
perform such thing on FS?

Actually I'm interested in knowing to wich specific label o region they are.

Bests,
Gabriel


El 12/12/12, Bruce Fischl <fis...@nmr.mgh.harvard.edu> escribió:
      Hi Gabriel

      we don't lateralize them by default, so look for WM_hypointensities (77) 
instead. It would be pretty easy to
      lateralize them based on neighboring labels.

      cheers
      Bruce


      On Wed, 12 Dec 2012, Gabriel Gonzalez Escamilla wrote:

      >
      >Dear Freesurfers,
      >
      >I'm looking for a way to compute the left and right WM-hypointensities, 
as volume values or images. They always
      appear empty in
      >the aseg.stats, and the corresponding segs No 78 & 79 do not appear in 
the aseg.mgz, and I'm a bit lost with it.
      >
      >Can any one help me?
      >
      >Best Regards,
      >Gabriel.
      >
      >


      The information in this e-mail is intended only for the person to whom it 
is
      addressed. If you believe this e-mail was sent to you in error and the 
e-mail
      contains patient information, please contact the Partners Compliance 
HelpLine at
      http://www.partners.org/complianceline . If the e-mail was sent to you in 
error
      but does not contain patient information, please contact the sender and 
properly
      dispose of the e-mail.


--
--------------------------
PhD. student Gabriel González-Escamilla
Laboratory of Functional Neuroscience
Department of Physiology, Anatomy, and Cell Biology
University Pablo de Olavide
Ctra. de Utrera, Km.1
41013 - Seville
- Spain -

Email: ggon...@upo.es
http://www.upo.es/neuroaging/es/
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

Reply via email to