Hi Bruce, Thanks for your fast reply. I checked it again and there is 131 GB disk space free on the device.
Best regards Sandra Zitat von Bruce Fischl <fis...@nmr.mgh.harvard.edu>: > Hi Sandra > > can you check to make sure that you have enough disk space and that > that partition isn't full? > > cheers > Bruce > On Wed, 9 Jan 2013, Sandra Preissler wrote: > >> Dear freesurfer users, >> >> I have an unexpected error using autorecon1. >> The error occurred during the skull stripping process of a person >> called ?PTpost_P04?. >> >> First I tried: recon-all ?autorecon1 ?s PTpost_P04 >> After the first error (recon-all -s PTpost_P04 exited with ERRORS) >> I checked the logfile and tried the following: >> cd >> /mnt/bp13dat/Studie43_Phantom_Arm/Statistik/4_MRT/freesurfer/PTpost_P04/mri >> >> followed directly by: >> mri_watershed -keep brainmask.auto.mgz brainmask.mgz brainmask.mgz >> -T1 -brain_atlas >> /opt/freesurfer/average/RB_all_withskull_2008-03-26.gca >> transforms/talairach_with_skull.lta T1.mgz brainmask.auto.mgz >> >> I became the error message: >> ?could not read 65536 bytes at slice 76? >> >> The information about the freesurfer version and linux version used are: >> FREESURFER_HOME: /opt/freesurfer >> Build stamp: freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0 >> Kernel info: Linux 2.6.34.10-0.6-default x86_64 >> >> It would be great if anybody could help me in solving this. >> >> Best regards >> Sandra >> >> >> ---------------------------------------------------------------- >> This message was sent through https://webmail.uni-jena.de > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to > you in error > but does not contain patient information, please contact the sender > and properly > dispose of the e-mail. > > ---------------------------------------------------------------- This message was sent through https://webmail.uni-jena.de _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
